Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP2BQ9UQN3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.31■□□□□ 0.84
CHMP2BQ9UQN3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.31■□□□□ 0.84
CHMP2BQ9UQN3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP2BQ9UQN3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.3■□□□□ 0.84
CHMP2BQ9UQN3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.3■□□□□ 0.84
CHMP2BQ9UQN3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CHMP2BQ9UQN3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP2BQ9UQN3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP2BQ9UQN3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP2BQ9UQN3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CHMP2BQ9UQN3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.3■□□□□ 0.84
CHMP2BQ9UQN3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP2BQ9UQN3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CHMP2BQ9UQN3 NTF6G-201ENST00000591094 616 ntBASIC20.3■□□□□ 0.84
CHMP2BQ9UQN3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP2BQ9UQN3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.3■□□□□ 0.84
CHMP2BQ9UQN3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP2BQ9UQN3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP2BQ9UQN3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP2BQ9UQN3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP2BQ9UQN3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP2BQ9UQN3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP2BQ9UQN3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP2BQ9UQN3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP2BQ9UQN3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CHMP2BQ9UQN3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP2BQ9UQN3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP2BQ9UQN3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CHMP2BQ9UQN3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CHMP2BQ9UQN3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP2BQ9UQN3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CHMP2BQ9UQN3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.29■□□□□ 0.84
CHMP2BQ9UQN3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.29■□□□□ 0.84
CHMP2BQ9UQN3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP2BQ9UQN3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP2BQ9UQN3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.29■□□□□ 0.84
CHMP2BQ9UQN3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP2BQ9UQN3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CHMP2BQ9UQN3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHMP2BQ9UQN3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP2BQ9UQN3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP2BQ9UQN3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.28■□□□□ 0.84
CHMP2BQ9UQN3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.28■□□□□ 0.84
CHMP2BQ9UQN3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.28■□□□□ 0.84
CHMP2BQ9UQN3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP2BQ9UQN3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.28■□□□□ 0.84
CHMP2BQ9UQN3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.28■□□□□ 0.84
CHMP2BQ9UQN3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP2BQ9UQN3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP2BQ9UQN3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP2BQ9UQN3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP2BQ9UQN3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP2BQ9UQN3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHMP2BQ9UQN3 TREX1-205ENST00000625293 1783 ntBASIC20.28■□□□□ 0.84
CHMP2BQ9UQN3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP2BQ9UQN3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP2BQ9UQN3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.27■□□□□ 0.84
CHMP2BQ9UQN3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP2BQ9UQN3 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.27■□□□□ 0.84
CHMP2BQ9UQN3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.27■□□□□ 0.84
CHMP2BQ9UQN3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP2BQ9UQN3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP2BQ9UQN3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP2BQ9UQN3 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.27■□□□□ 0.84
CHMP2BQ9UQN3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP2BQ9UQN3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CHMP2BQ9UQN3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.27■□□□□ 0.84
CHMP2BQ9UQN3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CHMP2BQ9UQN3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP2BQ9UQN3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CHMP2BQ9UQN3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CHMP2BQ9UQN3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.26■□□□□ 0.83
CHMP2BQ9UQN3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2BQ9UQN3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CHMP2BQ9UQN3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2BQ9UQN3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CHMP2BQ9UQN3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.26■□□□□ 0.83
CHMP2BQ9UQN3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2BQ9UQN3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.26■□□□□ 0.83
CHMP2BQ9UQN3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2BQ9UQN3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.26■□□□□ 0.83
CHMP2BQ9UQN3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.26■□□□□ 0.83
CHMP2BQ9UQN3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2BQ9UQN3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2BQ9UQN3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.26■□□□□ 0.83
CHMP2BQ9UQN3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2BQ9UQN3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2BQ9UQN3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2BQ9UQN3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2BQ9UQN3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.26■□□□□ 0.83
CHMP2BQ9UQN3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2BQ9UQN3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.25■□□□□ 0.83
CHMP2BQ9UQN3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2BQ9UQN3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2BQ9UQN3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2BQ9UQN3 PTBP1P-201ENST00000554374 1601 ntBASIC20.25■□□□□ 0.83
CHMP2BQ9UQN3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2BQ9UQN3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.25■□□□□ 0.83
CHMP2BQ9UQN3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms