Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC29.91■■■□□ 2.38
SHANK2Q9UPX8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SHANK2Q9UPX8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC29.91■■■□□ 2.38
SHANK2Q9UPX8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
SHANK2Q9UPX8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
SHANK2Q9UPX8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
SHANK2Q9UPX8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC29.91■■■□□ 2.38
SHANK2Q9UPX8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
SHANK2Q9UPX8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC29.91■■■□□ 2.38
SHANK2Q9UPX8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SHANK2Q9UPX8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SHANK2Q9UPX8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC29.91■■■□□ 2.38
SHANK2Q9UPX8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
SHANK2Q9UPX8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
SHANK2Q9UPX8 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC29.9■■■□□ 2.38
SHANK2Q9UPX8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
SHANK2Q9UPX8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
SHANK2Q9UPX8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC29.9■■■□□ 2.38
SHANK2Q9UPX8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC29.9■■■□□ 2.38
SHANK2Q9UPX8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC29.9■■■□□ 2.38
SHANK2Q9UPX8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC29.9■■■□□ 2.38
SHANK2Q9UPX8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
SHANK2Q9UPX8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC29.89■■■□□ 2.38
SHANK2Q9UPX8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
SHANK2Q9UPX8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC29.89■■■□□ 2.38
SHANK2Q9UPX8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC29.89■■■□□ 2.38
SHANK2Q9UPX8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC29.89■■■□□ 2.38
SHANK2Q9UPX8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
SHANK2Q9UPX8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC29.89■■■□□ 2.38
SHANK2Q9UPX8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
SHANK2Q9UPX8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC29.89■■■□□ 2.37
SHANK2Q9UPX8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
SHANK2Q9UPX8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC29.88■■■□□ 2.37
SHANK2Q9UPX8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC29.88■■■□□ 2.37
SHANK2Q9UPX8 MIR6786-201ENST00000616843 113 ntBASIC29.88■■■□□ 2.37
SHANK2Q9UPX8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC29.88■■■□□ 2.37
SHANK2Q9UPX8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC29.88■■■□□ 2.37
SHANK2Q9UPX8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
SHANK2Q9UPX8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC29.88■■■□□ 2.37
SHANK2Q9UPX8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
SHANK2Q9UPX8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
SHANK2Q9UPX8 MMP23A-201ENST00000234610 1017 ntBASIC29.87■■■□□ 2.37
SHANK2Q9UPX8 UNC93B2-201ENST00000285383 730 ntBASIC29.87■■■□□ 2.37
SHANK2Q9UPX8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC29.87■■■□□ 2.37
SHANK2Q9UPX8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC29.87■■■□□ 2.37
SHANK2Q9UPX8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC29.87■■■□□ 2.37
SHANK2Q9UPX8 AL445675.2-201ENST00000620291 557 ntBASIC29.87■■■□□ 2.37
SHANK2Q9UPX8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
SHANK2Q9UPX8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC29.87■■■□□ 2.37
SHANK2Q9UPX8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC29.87■■■□□ 2.37
SHANK2Q9UPX8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC29.87■■■□□ 2.37
SHANK2Q9UPX8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC29.87■■■□□ 2.37
SHANK2Q9UPX8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC29.87■■■□□ 2.37
SHANK2Q9UPX8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SHANK2Q9UPX8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC29.87■■■□□ 2.37
SHANK2Q9UPX8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SHANK2Q9UPX8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SHANK2Q9UPX8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC29.87■■■□□ 2.37
SHANK2Q9UPX8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
SHANK2Q9UPX8 MESTP1-201ENST00000404287 994 ntBASIC29.87■■■□□ 2.37
SHANK2Q9UPX8 KRT18P16-201ENST00000510337 1294 ntBASIC29.87■■■□□ 2.37
SHANK2Q9UPX8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC29.87■■■□□ 2.37
SHANK2Q9UPX8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC29.87■■■□□ 2.37
SHANK2Q9UPX8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
SHANK2Q9UPX8 FP700111.2-201ENST00000619190 1892 ntBASIC29.86■■■□□ 2.37
SHANK2Q9UPX8 TFP1-202ENST00000475455 1573 ntBASIC29.86■■■□□ 2.37
SHANK2Q9UPX8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC29.86■■■□□ 2.37
SHANK2Q9UPX8 AC007225.1-201ENST00000566331 1836 ntBASIC29.86■■■□□ 2.37
SHANK2Q9UPX8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
SHANK2Q9UPX8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
SHANK2Q9UPX8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC29.86■■■□□ 2.37
SHANK2Q9UPX8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC29.86■■■□□ 2.37
SHANK2Q9UPX8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
SHANK2Q9UPX8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
SHANK2Q9UPX8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
SHANK2Q9UPX8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC29.85■■■□□ 2.37
SHANK2Q9UPX8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC29.85■■■□□ 2.37
SHANK2Q9UPX8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC29.84■■■□□ 2.37
SHANK2Q9UPX8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
SHANK2Q9UPX8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC29.84■■■□□ 2.37
SHANK2Q9UPX8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC29.84■■■□□ 2.37
SHANK2Q9UPX8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
SHANK2Q9UPX8 AL049597.2-201ENST00000565575 961 ntBASIC29.84■■■□□ 2.37
SHANK2Q9UPX8 AL590326.2-201ENST00000625139 305 ntBASIC29.84■■■□□ 2.37
SHANK2Q9UPX8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
SHANK2Q9UPX8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
SHANK2Q9UPX8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC29.83■■■□□ 2.37
SHANK2Q9UPX8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC29.83■■■□□ 2.37
SHANK2Q9UPX8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
SHANK2Q9UPX8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SHANK2Q9UPX8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SHANK2Q9UPX8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
SHANK2Q9UPX8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC29.83■■■□□ 2.37
SHANK2Q9UPX8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC29.83■■■□□ 2.37
SHANK2Q9UPX8 FITM1-202ENST00000559294 800 ntBASIC29.83■■■□□ 2.37
SHANK2Q9UPX8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC29.83■■■□□ 2.37
SHANK2Q9UPX8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC29.83■■■□□ 2.37
SHANK2Q9UPX8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC29.83■■■□□ 2.37
SHANK2Q9UPX8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SHANK2Q9UPX8 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC29.83■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms