Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPIPA1Q9UND3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.42■□□□□ 0.54
NPIPA1Q9UND3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
NPIPA1Q9UND3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPIPA1Q9UND3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPIPA1Q9UND3 AC007225.1-201ENST00000566331 1836 ntBASIC18.42■□□□□ 0.54
NPIPA1Q9UND3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPIPA1Q9UND3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPA1Q9UND3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPA1Q9UND3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPA1Q9UND3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPA1Q9UND3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPA1Q9UND3 AL157384.1-201ENST00000445995 2473 ntBASIC18.41■□□□□ 0.54
NPIPA1Q9UND3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPA1Q9UND3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.41■□□□□ 0.54
NPIPA1Q9UND3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPA1Q9UND3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NPIPA1Q9UND3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.41■□□□□ 0.54
NPIPA1Q9UND3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.41■□□□□ 0.54
NPIPA1Q9UND3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.41■□□□□ 0.54
NPIPA1Q9UND3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPA1Q9UND3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.41■□□□□ 0.54
NPIPA1Q9UND3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPA1Q9UND3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPA1Q9UND3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPA1Q9UND3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPA1Q9UND3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPA1Q9UND3 FP700111.2-201ENST00000619190 1892 ntBASIC18.41■□□□□ 0.54
NPIPA1Q9UND3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPA1Q9UND3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 FEM1AP1-201ENST00000431297 1995 ntBASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPA1Q9UND3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NPIPA1Q9UND3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
NPIPA1Q9UND3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NPIPA1Q9UND3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.39■□□□□ 0.54
NPIPA1Q9UND3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NPIPA1Q9UND3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NPIPA1Q9UND3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NPIPA1Q9UND3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NPIPA1Q9UND3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPA1Q9UND3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.39■□□□□ 0.53
NPIPA1Q9UND3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NPIPA1Q9UND3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPA1Q9UND3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.39■□□□□ 0.53
NPIPA1Q9UND3 AL390719.1-204ENST00000412397 1219 ntBASIC18.39■□□□□ 0.53
NPIPA1Q9UND3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.39■□□□□ 0.53
NPIPA1Q9UND3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
NPIPA1Q9UND3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPA1Q9UND3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.39■□□□□ 0.53
NPIPA1Q9UND3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.39■□□□□ 0.53
NPIPA1Q9UND3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPA1Q9UND3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPA1Q9UND3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.39■□□□□ 0.53
NPIPA1Q9UND3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NPIPA1Q9UND3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPA1Q9UND3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
NPIPA1Q9UND3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPA1Q9UND3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPA1Q9UND3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPA1Q9UND3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPA1Q9UND3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPA1Q9UND3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPA1Q9UND3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NPIPA1Q9UND3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPA1Q9UND3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPA1Q9UND3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPA1Q9UND3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPA1Q9UND3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPA1Q9UND3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPA1Q9UND3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NPIPA1Q9UND3 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.38■□□□□ 0.53
NPIPA1Q9UND3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
NPIPA1Q9UND3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.38■□□□□ 0.53
NPIPA1Q9UND3 AC005829.2-201ENST00000571422 1056 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms