Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 KRT18P20-201ENST00000548986 1279 ntBASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF2Q9P2I0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
CPSF2Q9P2I0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CPSF2Q9P2I0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.04■□□□□ 0.8
CPSF2Q9P2I0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPSF2Q9P2I0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPSF2Q9P2I0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.04■□□□□ 0.8
CPSF2Q9P2I0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CPSF2Q9P2I0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPSF2Q9P2I0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPSF2Q9P2I0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPSF2Q9P2I0 ZNRF2P3-201ENST00000424200 374 ntBASIC20.04■□□□□ 0.8
CPSF2Q9P2I0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.04■□□□□ 0.8
CPSF2Q9P2I0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.04■□□□□ 0.8
CPSF2Q9P2I0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.04■□□□□ 0.8
CPSF2Q9P2I0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.04■□□□□ 0.8
CPSF2Q9P2I0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CPSF2Q9P2I0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPSF2Q9P2I0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
CPSF2Q9P2I0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.04■□□□□ 0.8
CPSF2Q9P2I0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPSF2Q9P2I0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPSF2Q9P2I0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPSF2Q9P2I0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF2Q9P2I0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.03■□□□□ 0.8
CPSF2Q9P2I0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
CPSF2Q9P2I0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF2Q9P2I0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF2Q9P2I0 AC091799.1-201ENST00000422823 811 ntBASIC20.03■□□□□ 0.8
CPSF2Q9P2I0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.03■□□□□ 0.8
CPSF2Q9P2I0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.03■□□□□ 0.8
CPSF2Q9P2I0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF2Q9P2I0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF2Q9P2I0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF2Q9P2I0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CPSF2Q9P2I0 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CPSF2Q9P2I0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.03■□□□□ 0.8
CPSF2Q9P2I0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CPSF2Q9P2I0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPSF2Q9P2I0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CPSF2Q9P2I0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPSF2Q9P2I0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CPSF2Q9P2I0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPSF2Q9P2I0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.02■□□□□ 0.8
CPSF2Q9P2I0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CPSF2Q9P2I0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPSF2Q9P2I0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPSF2Q9P2I0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPSF2Q9P2I0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CPSF2Q9P2I0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CPSF2Q9P2I0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.02■□□□□ 0.8
CPSF2Q9P2I0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.02■□□□□ 0.8
CPSF2Q9P2I0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.02■□□□□ 0.8
CPSF2Q9P2I0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CPSF2Q9P2I0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPSF2Q9P2I0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.02■□□□□ 0.8
CPSF2Q9P2I0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CPSF2Q9P2I0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
CPSF2Q9P2I0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CPSF2Q9P2I0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CPSF2Q9P2I0 RBM17P2-201ENST00000616397 1405 ntBASIC20.02■□□□□ 0.79
CPSF2Q9P2I0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms