Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CCM2LQ9NUG4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2LQ9NUG4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.97■□□□□ 0.63
CCM2LQ9NUG4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCM2LQ9NUG4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.97■□□□□ 0.63
CCM2LQ9NUG4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.97■□□□□ 0.63
CCM2LQ9NUG4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.97■□□□□ 0.63
CCM2LQ9NUG4 BID-214ENST00000617586 542 ntTSL 5 BASIC18.97■□□□□ 0.63
CCM2LQ9NUG4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.97■□□□□ 0.63
CCM2LQ9NUG4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCM2LQ9NUG4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2LQ9NUG4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.97■□□□□ 0.63
CCM2LQ9NUG4 AC093503.3-201ENST00000624917 2352 ntBASIC18.97■□□□□ 0.63
CCM2LQ9NUG4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.97■□□□□ 0.63
CCM2LQ9NUG4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2LQ9NUG4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2LQ9NUG4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.97■□□□□ 0.63
CCM2LQ9NUG4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.96■□□□□ 0.63
CCM2LQ9NUG4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2LQ9NUG4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.94■□□□□ 0.62
CCM2LQ9NUG4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCM2LQ9NUG4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCM2LQ9NUG4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCM2LQ9NUG4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCM2LQ9NUG4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCM2LQ9NUG4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CCM2LQ9NUG4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CCM2LQ9NUG4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.94■□□□□ 0.62
CCM2LQ9NUG4 CROCCP5-201ENST00000436658 830 ntBASIC18.94■□□□□ 0.62
CCM2LQ9NUG4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.94■□□□□ 0.62
CCM2LQ9NUG4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.94■□□□□ 0.62
CCM2LQ9NUG4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.94■□□□□ 0.62
CCM2LQ9NUG4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCM2LQ9NUG4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCM2LQ9NUG4 AC066615.1-201ENST00000640911 628 ntBASIC18.94■□□□□ 0.62
CCM2LQ9NUG4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
CCM2LQ9NUG4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CCM2LQ9NUG4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCM2LQ9NUG4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCM2LQ9NUG4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCM2LQ9NUG4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCM2LQ9NUG4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCM2LQ9NUG4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCM2LQ9NUG4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CCM2LQ9NUG4 BX119927.1-201ENST00000636596 1552 ntBASIC18.93■□□□□ 0.62
CCM2LQ9NUG4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms