Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AL512408.1-201ENST00000569378 2000 ntBASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 LINC01960-201ENST00000563759 1884 ntBASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 AL049796.1-201ENST00000565336 1766 ntBASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 AC092850.2-201ENST00000623821 2697 ntBASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC10.31□□□□□ -0.76
CDC42SE1Q9NRR8 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms