Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC42SE2Q9NRR3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 AC009237.14-201ENST00000609975 1594 ntBASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC42SE2Q9NRR3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 SP2-202ENST00000613139 908 ntTSL 5 BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 PWWP2AP1-201ENST00000429776 2273 ntBASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CDC42SE2Q9NRR3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42SE2Q9NRR3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42SE2Q9NRR3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC13.71□□□□□ -0.21
CDC42SE2Q9NRR3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42SE2Q9NRR3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42SE2Q9NRR3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42SE2Q9NRR3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42SE2Q9NRR3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42SE2Q9NRR3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42SE2Q9NRR3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms