Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
GDF3Q9NR23 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.04■□□□□ 0.96
GDF3Q9NR23 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
GDF3Q9NR23 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GDF3Q9NR23 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.04■□□□□ 0.96
GDF3Q9NR23 KRT18P6-201ENST00000555540 1265 ntBASIC21.04■□□□□ 0.96
GDF3Q9NR23 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.04■□□□□ 0.96
GDF3Q9NR23 AL138781.1-201ENST00000566567 1274 ntBASIC21.04■□□□□ 0.96
GDF3Q9NR23 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.04■□□□□ 0.96
GDF3Q9NR23 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.04■□□□□ 0.96
GDF3Q9NR23 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GDF3Q9NR23 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GDF3Q9NR23 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GDF3Q9NR23 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
GDF3Q9NR23 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.04■□□□□ 0.96
GDF3Q9NR23 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GDF3Q9NR23 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GDF3Q9NR23 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GDF3Q9NR23 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.04■□□□□ 0.96
GDF3Q9NR23 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GDF3Q9NR23 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.03■□□□□ 0.96
GDF3Q9NR23 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GDF3Q9NR23 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GDF3Q9NR23 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.03■□□□□ 0.96
GDF3Q9NR23 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.03■□□□□ 0.96
GDF3Q9NR23 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GDF3Q9NR23 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
GDF3Q9NR23 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.03■□□□□ 0.96
GDF3Q9NR23 AC105036.2-201ENST00000569468 176 ntBASIC21.03■□□□□ 0.96
GDF3Q9NR23 AC133552.2-202ENST00000575694 574 ntBASIC21.03■□□□□ 0.96
GDF3Q9NR23 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GDF3Q9NR23 AC013268.1-206ENST00000638368 961 ntBASIC21.03■□□□□ 0.96
GDF3Q9NR23 AC112229.1-201ENST00000639295 961 ntBASIC21.03■□□□□ 0.96
GDF3Q9NR23 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GDF3Q9NR23 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.03■□□□□ 0.96
GDF3Q9NR23 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GDF3Q9NR23 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.03■□□□□ 0.96
GDF3Q9NR23 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.03■□□□□ 0.96
GDF3Q9NR23 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.03■□□□□ 0.96
GDF3Q9NR23 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GDF3Q9NR23 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
GDF3Q9NR23 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
GDF3Q9NR23 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GDF3Q9NR23 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GDF3Q9NR23 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
GDF3Q9NR23 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
GDF3Q9NR23 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.02■□□□□ 0.96
GDF3Q9NR23 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GDF3Q9NR23 AC093484.2-201ENST00000580996 2166 ntBASIC21.02■□□□□ 0.96
GDF3Q9NR23 SLC7A5P1-201ENST00000568957 537 ntBASIC21.02■□□□□ 0.96
GDF3Q9NR23 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
GDF3Q9NR23 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GDF3Q9NR23 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
GDF3Q9NR23 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
GDF3Q9NR23 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.02■□□□□ 0.96
GDF3Q9NR23 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
GDF3Q9NR23 AL691432.2-201ENST00000607222 2038 ntBASIC21.02■□□□□ 0.96
GDF3Q9NR23 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
GDF3Q9NR23 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.02■□□□□ 0.95
GDF3Q9NR23 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
GDF3Q9NR23 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
GDF3Q9NR23 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
GDF3Q9NR23 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
GDF3Q9NR23 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.02■□□□□ 0.95
GDF3Q9NR23 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.01■□□□□ 0.95
GDF3Q9NR23 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDF3Q9NR23 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDF3Q9NR23 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDF3Q9NR23 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDF3Q9NR23 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDF3Q9NR23 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDF3Q9NR23 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDF3Q9NR23 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GDF3Q9NR23 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.01■□□□□ 0.95
GDF3Q9NR23 TREX1-205ENST00000625293 1783 ntBASIC21.01■□□□□ 0.95
GDF3Q9NR23 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.01■□□□□ 0.95
GDF3Q9NR23 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GDF3Q9NR23 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.01■□□□□ 0.95
GDF3Q9NR23 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.01■□□□□ 0.95
GDF3Q9NR23 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.01■□□□□ 0.95
GDF3Q9NR23 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GDF3Q9NR23 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GDF3Q9NR23 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDF3Q9NR23 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.01■□□□□ 0.95
GDF3Q9NR23 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GDF3Q9NR23 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDF3Q9NR23 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDF3Q9NR23 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.01■□□□□ 0.95
GDF3Q9NR23 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDF3Q9NR23 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.01■□□□□ 0.95
GDF3Q9NR23 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GDF3Q9NR23 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
GDF3Q9NR23 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21■□□□□ 0.95
GDF3Q9NR23 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GDF3Q9NR23 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
GDF3Q9NR23 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GDF3Q9NR23 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GDF3Q9NR23 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GDF3Q9NR23 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21■□□□□ 0.95
GDF3Q9NR23 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms