Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 AL512408.1-201ENST00000569378 2000 ntBASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 AL139384.1-201ENST00000612143 3047 ntBASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
C12orf4Q9NQ89 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C12orf4Q9NQ89 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C12orf4Q9NQ89 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C12orf4Q9NQ89 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C12orf4Q9NQ89 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C12orf4Q9NQ89 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.27■□□□□ 0.36
C12orf4Q9NQ89 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.27■□□□□ 0.36
C12orf4Q9NQ89 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C12orf4Q9NQ89 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C12orf4Q9NQ89 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
C12orf4Q9NQ89 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
C12orf4Q9NQ89 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.27■□□□□ 0.36
C12orf4Q9NQ89 TPRG1LP1-201ENST00000598702 760 ntBASIC17.27■□□□□ 0.36
C12orf4Q9NQ89 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C12orf4Q9NQ89 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
C12orf4Q9NQ89 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
C12orf4Q9NQ89 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
C12orf4Q9NQ89 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.27■□□□□ 0.35
C12orf4Q9NQ89 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
C12orf4Q9NQ89 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C12orf4Q9NQ89 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
C12orf4Q9NQ89 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C12orf4Q9NQ89 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
C12orf4Q9NQ89 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C12orf4Q9NQ89 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 KRT87P-202ENST00000534226 1464 ntBASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf4Q9NQ89 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.25■□□□□ 0.35
C12orf4Q9NQ89 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
C12orf4Q9NQ89 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
C12orf4Q9NQ89 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
C12orf4Q9NQ89 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C12orf4Q9NQ89 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.25■□□□□ 0.35
C12orf4Q9NQ89 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms