Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC29.63■■■□□ 2.33
SCAF1Q9H7N4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
SCAF1Q9H7N4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SCAF1Q9H7N4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SCAF1Q9H7N4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SCAF1Q9H7N4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SCAF1Q9H7N4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SCAF1Q9H7N4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC29.62■■■□□ 2.33
SCAF1Q9H7N4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC29.62■■■□□ 2.33
SCAF1Q9H7N4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC29.62■■■□□ 2.33
SCAF1Q9H7N4 AC120498.10-201ENST00000621827 505 ntBASIC29.62■■■□□ 2.33
SCAF1Q9H7N4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SCAF1Q9H7N4 Z98882.1-201ENST00000622160 2253 ntBASIC29.62■■■□□ 2.33
SCAF1Q9H7N4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC29.62■■■□□ 2.33
SCAF1Q9H7N4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SCAF1Q9H7N4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC29.61■■■□□ 2.33
SCAF1Q9H7N4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SCAF1Q9H7N4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SCAF1Q9H7N4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC29.61■■■□□ 2.33
SCAF1Q9H7N4 AL162412.1-201ENST00000567129 965 ntBASIC29.61■■■□□ 2.33
SCAF1Q9H7N4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC29.61■■■□□ 2.33
SCAF1Q9H7N4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC29.61■■■□□ 2.33
SCAF1Q9H7N4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC29.61■■■□□ 2.33
SCAF1Q9H7N4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
SCAF1Q9H7N4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC29.6■■■□□ 2.33
SCAF1Q9H7N4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC29.6■■■□□ 2.33
SCAF1Q9H7N4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
SCAF1Q9H7N4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC29.6■■■□□ 2.33
SCAF1Q9H7N4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
SCAF1Q9H7N4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC29.6■■■□□ 2.33
SCAF1Q9H7N4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC29.6■■■□□ 2.33
SCAF1Q9H7N4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
SCAF1Q9H7N4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC29.6■■■□□ 2.33
SCAF1Q9H7N4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
SCAF1Q9H7N4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC29.6■■■□□ 2.33
SCAF1Q9H7N4 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC29.6■■■□□ 2.33
SCAF1Q9H7N4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC29.6■■■□□ 2.33
SCAF1Q9H7N4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC29.6■■■□□ 2.33
SCAF1Q9H7N4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC29.6■■■□□ 2.33
SCAF1Q9H7N4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SCAF1Q9H7N4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
SCAF1Q9H7N4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC29.59■■■□□ 2.33
SCAF1Q9H7N4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC29.59■■■□□ 2.33
SCAF1Q9H7N4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC29.59■■■□□ 2.33
SCAF1Q9H7N4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC29.59■■■□□ 2.33
SCAF1Q9H7N4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
SCAF1Q9H7N4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC29.59■■■□□ 2.33
SCAF1Q9H7N4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC29.59■■■□□ 2.33
SCAF1Q9H7N4 AC092865.7-201ENST00000641832 219 ntBASIC29.59■■■□□ 2.33
SCAF1Q9H7N4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SCAF1Q9H7N4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SCAF1Q9H7N4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC29.59■■■□□ 2.33
SCAF1Q9H7N4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
SCAF1Q9H7N4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
SCAF1Q9H7N4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC29.58■■■□□ 2.33
SCAF1Q9H7N4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
SCAF1Q9H7N4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
SCAF1Q9H7N4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
SCAF1Q9H7N4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC29.58■■■□□ 2.33
SCAF1Q9H7N4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC29.58■■■□□ 2.33
SCAF1Q9H7N4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC29.58■■■□□ 2.33
SCAF1Q9H7N4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC29.58■■■□□ 2.33
SCAF1Q9H7N4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC29.58■■■□□ 2.33
SCAF1Q9H7N4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
SCAF1Q9H7N4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
SCAF1Q9H7N4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC29.58■■■□□ 2.33
SCAF1Q9H7N4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC29.57■■■□□ 2.32
SCAF1Q9H7N4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC29.57■■■□□ 2.32
SCAF1Q9H7N4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC29.57■■■□□ 2.32
SCAF1Q9H7N4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
SCAF1Q9H7N4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
SCAF1Q9H7N4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
SCAF1Q9H7N4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC29.57■■■□□ 2.32
SCAF1Q9H7N4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC29.57■■■□□ 2.32
SCAF1Q9H7N4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
SCAF1Q9H7N4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SCAF1Q9H7N4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
SCAF1Q9H7N4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
SCAF1Q9H7N4 AL121894.2-201ENST00000602977 491 ntBASIC29.57■■■□□ 2.32
SCAF1Q9H7N4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC29.57■■■□□ 2.32
SCAF1Q9H7N4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC29.57■■■□□ 2.32
SCAF1Q9H7N4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SCAF1Q9H7N4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
SCAF1Q9H7N4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
SCAF1Q9H7N4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC29.56■■■□□ 2.32
SCAF1Q9H7N4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
SCAF1Q9H7N4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SCAF1Q9H7N4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SCAF1Q9H7N4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
SCAF1Q9H7N4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC29.56■■■□□ 2.32
SCAF1Q9H7N4 OR2A1-AS1-207ENST00000486094 819 ntBASIC29.56■■■□□ 2.32
SCAF1Q9H7N4 EEF1DP3-203ENST00000566025 782 ntBASIC29.56■■■□□ 2.32
SCAF1Q9H7N4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC29.56■■■□□ 2.32
SCAF1Q9H7N4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC29.56■■■□□ 2.32
SCAF1Q9H7N4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SCAF1Q9H7N4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
SCAF1Q9H7N4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SCAF1Q9H7N4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC29.56■■■□□ 2.32
SCAF1Q9H7N4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
SCAF1Q9H7N4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC29.55■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms