Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC24.43■■□□□ 1.5
RTFDC1Q9BY42 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTFDC1Q9BY42 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RTFDC1Q9BY42 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RTFDC1Q9BY42 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTFDC1Q9BY42 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTFDC1Q9BY42 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTFDC1Q9BY42 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTFDC1Q9BY42 AL049796.1-201ENST00000565336 1766 ntBASIC24.42■■□□□ 1.5
RTFDC1Q9BY42 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC24.42■■□□□ 1.5
RTFDC1Q9BY42 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTFDC1Q9BY42 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC24.42■■□□□ 1.5
RTFDC1Q9BY42 DUX4L26-201ENST00000489078 1255 ntBASIC24.42■■□□□ 1.5
RTFDC1Q9BY42 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC24.42■■□□□ 1.5
RTFDC1Q9BY42 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTFDC1Q9BY42 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
RTFDC1Q9BY42 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTFDC1Q9BY42 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
RTFDC1Q9BY42 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.42■■□□□ 1.5
RTFDC1Q9BY42 KRT8P20-201ENST00000423953 1409 ntBASIC24.42■■□□□ 1.5
RTFDC1Q9BY42 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RTFDC1Q9BY42 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
RTFDC1Q9BY42 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RTFDC1Q9BY42 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
RTFDC1Q9BY42 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RTFDC1Q9BY42 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
RTFDC1Q9BY42 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC24.41■■□□□ 1.5
RTFDC1Q9BY42 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
RTFDC1Q9BY42 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC24.41■■□□□ 1.5
RTFDC1Q9BY42 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RTFDC1Q9BY42 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RTFDC1Q9BY42 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.41■■□□□ 1.5
RTFDC1Q9BY42 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RTFDC1Q9BY42 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC24.41■■□□□ 1.5
RTFDC1Q9BY42 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
RTFDC1Q9BY42 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTFDC1Q9BY42 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
RTFDC1Q9BY42 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTFDC1Q9BY42 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC24.4■■□□□ 1.5
RTFDC1Q9BY42 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTFDC1Q9BY42 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTFDC1Q9BY42 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC24.4■■□□□ 1.5
RTFDC1Q9BY42 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC24.4■■□□□ 1.5
RTFDC1Q9BY42 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC24.4■■□□□ 1.5
RTFDC1Q9BY42 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RTFDC1Q9BY42 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC24.4■■□□□ 1.5
RTFDC1Q9BY42 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTFDC1Q9BY42 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RTFDC1Q9BY42 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC24.4■■□□□ 1.5
RTFDC1Q9BY42 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTFDC1Q9BY42 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RTFDC1Q9BY42 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC24.39■■□□□ 1.5
RTFDC1Q9BY42 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.5
RTFDC1Q9BY42 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC24.39■■□□□ 1.5
RTFDC1Q9BY42 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RTFDC1Q9BY42 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RTFDC1Q9BY42 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
RTFDC1Q9BY42 PPP1R14BP5-201ENST00000440334 435 ntBASIC24.39■■□□□ 1.49
RTFDC1Q9BY42 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC24.39■■□□□ 1.49
RTFDC1Q9BY42 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.49
RTFDC1Q9BY42 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
RTFDC1Q9BY42 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RTFDC1Q9BY42 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RTFDC1Q9BY42 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
RTFDC1Q9BY42 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RTFDC1Q9BY42 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC24.38■■□□□ 1.49
RTFDC1Q9BY42 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTFDC1Q9BY42 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RTFDC1Q9BY42 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RTFDC1Q9BY42 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTFDC1Q9BY42 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTFDC1Q9BY42 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTFDC1Q9BY42 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
RTFDC1Q9BY42 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC24.38■■□□□ 1.49
RTFDC1Q9BY42 C1QL1P1-201ENST00000568105 661 ntBASIC24.38■■□□□ 1.49
RTFDC1Q9BY42 AC026271.3-201ENST00000571884 352 ntBASIC24.38■■□□□ 1.49
RTFDC1Q9BY42 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
RTFDC1Q9BY42 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
RTFDC1Q9BY42 AL031985.4-201ENST00000642138 673 ntBASIC24.38■■□□□ 1.49
RTFDC1Q9BY42 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RTFDC1Q9BY42 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTFDC1Q9BY42 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
RTFDC1Q9BY42 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RTFDC1Q9BY42 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC24.37■■□□□ 1.49
RTFDC1Q9BY42 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC24.37■■□□□ 1.49
RTFDC1Q9BY42 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC24.37■■□□□ 1.49
RTFDC1Q9BY42 LTBR-211ENST00000543190 785 ntTSL 3 BASIC24.37■■□□□ 1.49
RTFDC1Q9BY42 AC010203.1-204ENST00000548782 407 ntBASIC24.37■■□□□ 1.49
RTFDC1Q9BY42 AP005242.2-201ENST00000580065 1175 ntBASIC24.37■■□□□ 1.49
RTFDC1Q9BY42 NTF6B-201ENST00000591913 560 ntBASIC24.37■■□□□ 1.49
RTFDC1Q9BY42 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC24.37■■□□□ 1.49
RTFDC1Q9BY42 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
RTFDC1Q9BY42 AL445675.2-201ENST00000620291 557 ntBASIC24.37■■□□□ 1.49
RTFDC1Q9BY42 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
RTFDC1Q9BY42 FSCN1P1-201ENST00000568912 1481 ntBASIC24.37■■□□□ 1.49
RTFDC1Q9BY42 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC24.37■■□□□ 1.49
RTFDC1Q9BY42 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
RTFDC1Q9BY42 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.37■■□□□ 1.49
RTFDC1Q9BY42 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
RTFDC1Q9BY42 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms