Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM62Q9BVG3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.83■□□□□ 0.93
TRIM62Q9BVG3 AC008403.3-201ENST00000598924 454 ntBASIC20.83■□□□□ 0.93
TRIM62Q9BVG3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM62Q9BVG3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM62Q9BVG3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM62Q9BVG3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
TRIM62Q9BVG3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.83■□□□□ 0.92
TRIM62Q9BVG3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
TRIM62Q9BVG3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM62Q9BVG3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM62Q9BVG3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM62Q9BVG3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 RPS2P52-201ENST00000469610 820 ntBASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM62Q9BVG3 LINC01006-201ENST00000333319 2292 ntBASIC20.81■□□□□ 0.92
TRIM62Q9BVG3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM62Q9BVG3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM62Q9BVG3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM62Q9BVG3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM62Q9BVG3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TRIM62Q9BVG3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.81■□□□□ 0.92
TRIM62Q9BVG3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.81■□□□□ 0.92
TRIM62Q9BVG3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.81■□□□□ 0.92
TRIM62Q9BVG3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
TRIM62Q9BVG3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM62Q9BVG3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM62Q9BVG3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM62Q9BVG3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM62Q9BVG3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM62Q9BVG3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM62Q9BVG3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
TRIM62Q9BVG3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM62Q9BVG3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM62Q9BVG3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM62Q9BVG3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TRIM62Q9BVG3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM62Q9BVG3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM62Q9BVG3 MIR4651-201ENST00000582622 73 ntBASIC20.8■□□□□ 0.92
TRIM62Q9BVG3 AL121829.2-201ENST00000620908 328 ntBASIC20.8■□□□□ 0.92
TRIM62Q9BVG3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM62Q9BVG3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM62Q9BVG3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TRIM62Q9BVG3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM62Q9BVG3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM62Q9BVG3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM62Q9BVG3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TRIM62Q9BVG3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM62Q9BVG3 PHGDH-210ENST00000641115 1638 ntBASIC20.79■□□□□ 0.92
TRIM62Q9BVG3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM62Q9BVG3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM62Q9BVG3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM62Q9BVG3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TRIM62Q9BVG3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM62Q9BVG3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM62Q9BVG3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.79■□□□□ 0.92
TRIM62Q9BVG3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TRIM62Q9BVG3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM62Q9BVG3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM62Q9BVG3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM62Q9BVG3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM62Q9BVG3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM62Q9BVG3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
TRIM62Q9BVG3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM62Q9BVG3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM62Q9BVG3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TRIM62Q9BVG3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM62Q9BVG3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM62Q9BVG3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM62Q9BVG3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM62Q9BVG3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM62Q9BVG3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM62Q9BVG3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM62Q9BVG3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM62Q9BVG3 TSPY20P-201ENST00000450910 630 ntBASIC20.78■□□□□ 0.92
TRIM62Q9BVG3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
TRIM62Q9BVG3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms