Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 REXO2-208ENST00000539754 791 ntTSL 2 BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UPK3BQ9BT76 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC13.86□□□□□ -0.19
UPK3BQ9BT76 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK3BQ9BT76 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC13.86□□□□□ -0.19
UPK3BQ9BT76 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC13.86□□□□□ -0.19
UPK3BQ9BT76 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK3BQ9BT76 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK3BQ9BT76 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UPK3BQ9BT76 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK3BQ9BT76 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK3BQ9BT76 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK3BQ9BT76 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UPK3BQ9BT76 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
UPK3BQ9BT76 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK3BQ9BT76 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UPK3BQ9BT76 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.86□□□□□ -0.19
UPK3BQ9BT76 SLC29A4P2-201ENST00000504749 1089 ntBASIC13.86□□□□□ -0.19
UPK3BQ9BT76 AC005829.2-201ENST00000571422 1056 ntBASIC13.86□□□□□ -0.19
UPK3BQ9BT76 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
UPK3BQ9BT76 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK3BQ9BT76 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK3BQ9BT76 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK3BQ9BT76 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK3BQ9BT76 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 AL390719.1-204ENST00000412397 1219 ntBASIC13.85□□□□□ -0.19
UPK3BQ9BT76 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 KRT17P3-201ENST00000420566 1262 ntBASIC13.85□□□□□ -0.19
UPK3BQ9BT76 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 AC008403.3-201ENST00000598924 454 ntBASIC13.85□□□□□ -0.19
UPK3BQ9BT76 AC006058.3-201ENST00000606217 1069 ntBASIC13.85□□□□□ -0.19
UPK3BQ9BT76 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
UPK3BQ9BT76 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms