Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.85■□□□□ 0.29
HDHD3Q9BSH5 AC005332.7-201ENST00000614046 2005 ntBASIC16.85■□□□□ 0.29
HDHD3Q9BSH5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HDHD3Q9BSH5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.85■□□□□ 0.29
HDHD3Q9BSH5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HDHD3Q9BSH5 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HDHD3Q9BSH5 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.85■□□□□ 0.29
HDHD3Q9BSH5 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.84■□□□□ 0.29
HDHD3Q9BSH5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HDHD3Q9BSH5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HDHD3Q9BSH5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HDHD3Q9BSH5 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HDHD3Q9BSH5 KRT19P1-201ENST00000405746 1186 ntBASIC16.84■□□□□ 0.29
HDHD3Q9BSH5 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.84■□□□□ 0.29
HDHD3Q9BSH5 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.84■□□□□ 0.29
HDHD3Q9BSH5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HDHD3Q9BSH5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.84■□□□□ 0.29
HDHD3Q9BSH5 MYCNOS-205ENST00000641950 531 ntBASIC16.84■□□□□ 0.29
HDHD3Q9BSH5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.84■□□□□ 0.29
HDHD3Q9BSH5 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HDHD3Q9BSH5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HDHD3Q9BSH5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
HDHD3Q9BSH5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HDHD3Q9BSH5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HDHD3Q9BSH5 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HDHD3Q9BSH5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.84■□□□□ 0.29
HDHD3Q9BSH5 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.84■□□□□ 0.29
HDHD3Q9BSH5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.84■□□□□ 0.29
HDHD3Q9BSH5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HDHD3Q9BSH5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HDHD3Q9BSH5 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HDHD3Q9BSH5 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 AC097381.1-201ENST00000429019 1296 ntBASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 AC087633.2-202ENST00000565166 1439 ntBASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
HDHD3Q9BSH5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 ZNRF2P3-201ENST00000424200 374 ntBASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HDHD3Q9BSH5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HDHD3Q9BSH5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HDHD3Q9BSH5 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HDHD3Q9BSH5 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HDHD3Q9BSH5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
HDHD3Q9BSH5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HDHD3Q9BSH5 CYP21A1P-202ENST00000354927 1481 ntBASIC16.81■□□□□ 0.28
HDHD3Q9BSH5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HDHD3Q9BSH5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HDHD3Q9BSH5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HDHD3Q9BSH5 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.81■□□□□ 0.28
HDHD3Q9BSH5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HDHD3Q9BSH5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HDHD3Q9BSH5 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HDHD3Q9BSH5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.81■□□□□ 0.28
HDHD3Q9BSH5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms