Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CMSS1Q9BQ75 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CMSS1Q9BQ75 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CMSS1Q9BQ75 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CMSS1Q9BQ75 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.02■□□□□ 0.32
CMSS1Q9BQ75 AC105265.2-201ENST00000467189 838 ntBASIC17.02■□□□□ 0.32
CMSS1Q9BQ75 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.02■□□□□ 0.32
CMSS1Q9BQ75 FAM21FP-204ENST00000608637 956 ntBASIC17.02■□□□□ 0.32
CMSS1Q9BQ75 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CMSS1Q9BQ75 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CMSS1Q9BQ75 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CMSS1Q9BQ75 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CMSS1Q9BQ75 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 AC091799.1-201ENST00000422823 811 ntBASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 AC243732.1-201ENST00000612648 864 ntBASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CMSS1Q9BQ75 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CMSS1Q9BQ75 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CMSS1Q9BQ75 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CMSS1Q9BQ75 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CMSS1Q9BQ75 AC116562.4-201ENST00000641316 2276 ntBASIC17■□□□□ 0.31
CMSS1Q9BQ75 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CMSS1Q9BQ75 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CMSS1Q9BQ75 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17■□□□□ 0.31
CMSS1Q9BQ75 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CMSS1Q9BQ75 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CMSS1Q9BQ75 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17■□□□□ 0.31
CMSS1Q9BQ75 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CMSS1Q9BQ75 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CMSS1Q9BQ75 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CMSS1Q9BQ75 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17■□□□□ 0.31
CMSS1Q9BQ75 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17■□□□□ 0.31
CMSS1Q9BQ75 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17■□□□□ 0.31
CMSS1Q9BQ75 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17■□□□□ 0.31
CMSS1Q9BQ75 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17■□□□□ 0.31
CMSS1Q9BQ75 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CMSS1Q9BQ75 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17■□□□□ 0.31
CMSS1Q9BQ75 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17■□□□□ 0.31
CMSS1Q9BQ75 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CMSS1Q9BQ75 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CMSS1Q9BQ75 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17■□□□□ 0.31
CMSS1Q9BQ75 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17■□□□□ 0.31
CMSS1Q9BQ75 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CMSS1Q9BQ75 H19-201ENST00000411754 1788 ntTSL 5 BASIC17■□□□□ 0.31
CMSS1Q9BQ75 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CMSS1Q9BQ75 AC125437.2-201ENST00000625180 2167 ntBASIC16.99■□□□□ 0.31
CMSS1Q9BQ75 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CMSS1Q9BQ75 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.99■□□□□ 0.31
CMSS1Q9BQ75 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.99■□□□□ 0.31
CMSS1Q9BQ75 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CMSS1Q9BQ75 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CMSS1Q9BQ75 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.99■□□□□ 0.31
CMSS1Q9BQ75 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.99■□□□□ 0.31
CMSS1Q9BQ75 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CMSS1Q9BQ75 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.99■□□□□ 0.31
CMSS1Q9BQ75 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CMSS1Q9BQ75 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CMSS1Q9BQ75 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.99■□□□□ 0.31
CMSS1Q9BQ75 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CMSS1Q9BQ75 AC018445.3-201ENST00000624177 1945 ntBASIC16.99■□□□□ 0.31
CMSS1Q9BQ75 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CMSS1Q9BQ75 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CMSS1Q9BQ75 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CMSS1Q9BQ75 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CMSS1Q9BQ75 TMEM179-206ENST00000616017 1645 ntBASIC16.99■□□□□ 0.31
CMSS1Q9BQ75 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
CMSS1Q9BQ75 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CMSS1Q9BQ75 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CMSS1Q9BQ75 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMSS1Q9BQ75 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
CMSS1Q9BQ75 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMSS1Q9BQ75 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CMSS1Q9BQ75 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.98■□□□□ 0.31
CMSS1Q9BQ75 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMSS1Q9BQ75 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms