Protein–RNA interactions for Protein: Q99878

HIST1H2AJ, Histone H2A type 1-J, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AJQ99878 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H2AJQ99878 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H2AJQ99878 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H2AJQ99878 HLA-G-202ENST00000376815 851 ntBASIC19.59■□□□□ 0.73
HIST1H2AJQ99878 HLA-G-203ENST00000376818 1127 ntBASIC19.59■□□□□ 0.73
HIST1H2AJQ99878 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.59■□□□□ 0.73
HIST1H2AJQ99878 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.59■□□□□ 0.73
HIST1H2AJQ99878 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H2AJQ99878 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H2AJQ99878 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H2AJQ99878 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.59■□□□□ 0.73
HIST1H2AJQ99878 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H2AJQ99878 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H2AJQ99878 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H2AJQ99878 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H2AJQ99878 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H2AJQ99878 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H2AJQ99878 KRT8P17-201ENST00000453110 1448 ntBASIC19.59■□□□□ 0.73
HIST1H2AJQ99878 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H2AJQ99878 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HIST1H2AJQ99878 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.58■□□□□ 0.73
HIST1H2AJQ99878 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HIST1H2AJQ99878 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST1H2AJQ99878 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
HIST1H2AJQ99878 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST1H2AJQ99878 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
HIST1H2AJQ99878 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HIST1H2AJQ99878 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.58■□□□□ 0.72
HIST1H2AJQ99878 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.58■□□□□ 0.72
HIST1H2AJQ99878 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.58■□□□□ 0.72
HIST1H2AJQ99878 GPX1P1-201ENST00000388829 606 ntBASIC19.58■□□□□ 0.72
HIST1H2AJQ99878 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.58■□□□□ 0.72
HIST1H2AJQ99878 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.58■□□□□ 0.72
HIST1H2AJQ99878 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.58■□□□□ 0.72
HIST1H2AJQ99878 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
HIST1H2AJQ99878 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HIST1H2AJQ99878 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
HIST1H2AJQ99878 KRT8P20-201ENST00000423953 1409 ntBASIC19.58■□□□□ 0.72
HIST1H2AJQ99878 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HIST1H2AJQ99878 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
HIST1H2AJQ99878 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.58■□□□□ 0.72
HIST1H2AJQ99878 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HIST1H2AJQ99878 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HIST1H2AJQ99878 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 AC138932.1-201ENST00000534164 6830 ntBASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 BX119927.1-201ENST00000636596 1552 ntBASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.57■□□□□ 0.72
HIST1H2AJQ99878 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 SLC25A24-204ENST00000569674 2357 ntBASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 MIPEPP3-201ENST00000412105 444 ntBASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 NCF1B-203ENST00000435988 1254 ntBASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 AL031963.3-201ENST00000606441 850 ntBASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.56■□□□□ 0.72
HIST1H2AJQ99878 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST1H2AJQ99878 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms