Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21■□□□□ 0.95
SMOQ99835 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21■□□□□ 0.95
SMOQ99835 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SMOQ99835 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SMOQ99835 AL121829.2-201ENST00000620908 328 ntBASIC21■□□□□ 0.95
SMOQ99835 AL023875.1-201ENST00000640777 796 ntBASIC21■□□□□ 0.95
SMOQ99835 KRT16P6-202ENST00000425692 1426 ntBASIC21■□□□□ 0.95
SMOQ99835 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMOQ99835 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMOQ99835 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMOQ99835 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21■□□□□ 0.95
SMOQ99835 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SMOQ99835 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMOQ99835 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMOQ99835 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SMOQ99835 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21■□□□□ 0.95
SMOQ99835 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21■□□□□ 0.95
SMOQ99835 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMOQ99835 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SMOQ99835 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMOQ99835 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.99■□□□□ 0.95
SMOQ99835 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SMOQ99835 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMOQ99835 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SMOQ99835 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMOQ99835 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.99■□□□□ 0.95
SMOQ99835 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.99■□□□□ 0.95
SMOQ99835 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SMOQ99835 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.99■□□□□ 0.95
SMOQ99835 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.99■□□□□ 0.95
SMOQ99835 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
SMOQ99835 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.99■□□□□ 0.95
SMOQ99835 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMOQ99835 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.99■□□□□ 0.95
SMOQ99835 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMOQ99835 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMOQ99835 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMOQ99835 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMOQ99835 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SMOQ99835 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMOQ99835 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMOQ99835 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
SMOQ99835 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.98■□□□□ 0.95
SMOQ99835 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMOQ99835 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.98■□□□□ 0.95
SMOQ99835 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.98■□□□□ 0.95
SMOQ99835 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.98■□□□□ 0.95
SMOQ99835 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.98■□□□□ 0.95
SMOQ99835 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.98■□□□□ 0.95
SMOQ99835 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.98■□□□□ 0.95
SMOQ99835 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.98■□□□□ 0.95
SMOQ99835 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMOQ99835 AL391422.3-201ENST00000603791 2761 ntBASIC20.98■□□□□ 0.95
SMOQ99835 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
SMOQ99835 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SMOQ99835 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.97■□□□□ 0.95
SMOQ99835 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMOQ99835 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMOQ99835 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMOQ99835 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.97■□□□□ 0.95
SMOQ99835 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.97■□□□□ 0.95
SMOQ99835 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMOQ99835 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.97■□□□□ 0.95
SMOQ99835 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMOQ99835 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMOQ99835 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMOQ99835 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
SMOQ99835 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.97■□□□□ 0.95
SMOQ99835 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.97■□□□□ 0.95
SMOQ99835 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.97■□□□□ 0.95
SMOQ99835 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.97■□□□□ 0.95
SMOQ99835 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SMOQ99835 AC124016.1-201ENST00000609552 612 ntBASIC20.97■□□□□ 0.95
SMOQ99835 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.97■□□□□ 0.95
SMOQ99835 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMOQ99835 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.97■□□□□ 0.95
SMOQ99835 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
SMOQ99835 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMOQ99835 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
SMOQ99835 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SMOQ99835 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMOQ99835 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SMOQ99835 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.96■□□□□ 0.95
SMOQ99835 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMOQ99835 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.96■□□□□ 0.95
SMOQ99835 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.96■□□□□ 0.95
SMOQ99835 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMOQ99835 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMOQ99835 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMOQ99835 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMOQ99835 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.96■□□□□ 0.95
SMOQ99835 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.96■□□□□ 0.95
SMOQ99835 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.96■□□□□ 0.95
SMOQ99835 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.96■□□□□ 0.95
SMOQ99835 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.96■□□□□ 0.95
SMOQ99835 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SMOQ99835 AL121906.2-201ENST00000621597 723 ntBASIC20.96■□□□□ 0.95
SMOQ99835 AC066615.1-201ENST00000640911 628 ntBASIC20.96■□□□□ 0.95
SMOQ99835 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMOQ99835 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms