Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.74■□□□□ 0.27
CCL13Q99616 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL13Q99616 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCL13Q99616 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.74■□□□□ 0.27
CCL13Q99616 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCL13Q99616 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCL13Q99616 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL13Q99616 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CCL13Q99616 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.74■□□□□ 0.27
CCL13Q99616 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCL13Q99616 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CCL13Q99616 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL13Q99616 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.73■□□□□ 0.27
CCL13Q99616 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL13Q99616 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL13Q99616 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCL13Q99616 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.73■□□□□ 0.27
CCL13Q99616 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL13Q99616 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL13Q99616 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL13Q99616 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.73■□□□□ 0.27
CCL13Q99616 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.73■□□□□ 0.27
CCL13Q99616 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.73■□□□□ 0.27
CCL13Q99616 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.73■□□□□ 0.27
CCL13Q99616 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL13Q99616 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL13Q99616 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCL13Q99616 AL162377.1-201ENST00000618844 1793 ntBASIC16.73■□□□□ 0.27
CCL13Q99616 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL13Q99616 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCL13Q99616 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL13Q99616 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.73■□□□□ 0.27
CCL13Q99616 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
CCL13Q99616 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCL13Q99616 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL13Q99616 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CCL13Q99616 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CCL13Q99616 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL13Q99616 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL13Q99616 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL13Q99616 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL13Q99616 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL13Q99616 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL13Q99616 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.72■□□□□ 0.27
CCL13Q99616 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CCL13Q99616 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CCL13Q99616 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL13Q99616 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL13Q99616 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCL13Q99616 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.72■□□□□ 0.27
CCL13Q99616 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.72■□□□□ 0.27
CCL13Q99616 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.72■□□□□ 0.27
CCL13Q99616 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL13Q99616 CD99P1-205ENST00000527459 561 ntBASIC16.72■□□□□ 0.27
CCL13Q99616 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL13Q99616 AC005829.2-201ENST00000571422 1056 ntBASIC16.72■□□□□ 0.27
CCL13Q99616 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.72■□□□□ 0.27
CCL13Q99616 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL13Q99616 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCL13Q99616 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCL13Q99616 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL13Q99616 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.72■□□□□ 0.27
CCL13Q99616 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL13Q99616 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL13Q99616 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.71■□□□□ 0.27
CCL13Q99616 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.71■□□□□ 0.27
CCL13Q99616 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.71■□□□□ 0.27
CCL13Q99616 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.71■□□□□ 0.27
CCL13Q99616 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL13Q99616 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.71■□□□□ 0.27
CCL13Q99616 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.71■□□□□ 0.27
CCL13Q99616 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCL13Q99616 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL13Q99616 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.71■□□□□ 0.27
CCL13Q99616 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.71■□□□□ 0.27
CCL13Q99616 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.71■□□□□ 0.27
CCL13Q99616 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.71■□□□□ 0.27
CCL13Q99616 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.71■□□□□ 0.27
CCL13Q99616 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL13Q99616 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.71■□□□□ 0.27
CCL13Q99616 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL13Q99616 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL13Q99616 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL13Q99616 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL13Q99616 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
CCL13Q99616 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CCL13Q99616 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCL13Q99616 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCL13Q99616 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCL13Q99616 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL13Q99616 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
CCL13Q99616 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCL13Q99616 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL13Q99616 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL13Q99616 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL13Q99616 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.7■□□□□ 0.26
CCL13Q99616 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCL13Q99616 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCL13Q99616 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.7■□□□□ 0.26
CCL13Q99616 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms