Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIPA1Q96FS4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.09■□□□□ 0.81
SIPA1Q96FS4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIPA1Q96FS4 AC087499.1-201ENST00000418141 1075 ntBASIC20.09■□□□□ 0.81
SIPA1Q96FS4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.09■□□□□ 0.81
SIPA1Q96FS4 AL355355.2-201ENST00000442321 338 ntBASIC20.09■□□□□ 0.81
SIPA1Q96FS4 FAM210CP-201ENST00000445714 574 ntBASIC20.09■□□□□ 0.81
SIPA1Q96FS4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
SIPA1Q96FS4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.09■□□□□ 0.81
SIPA1Q96FS4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.09■□□□□ 0.81
SIPA1Q96FS4 CD177P1-201ENST00000606252 935 ntBASIC20.09■□□□□ 0.81
SIPA1Q96FS4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.09■□□□□ 0.81
SIPA1Q96FS4 AC133561.5-201ENST00000635547 218 ntBASIC20.09■□□□□ 0.81
SIPA1Q96FS4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SIPA1Q96FS4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SIPA1Q96FS4 AL121603.2-201ENST00000557373 2117 ntBASIC20.09■□□□□ 0.81
SIPA1Q96FS4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.09■□□□□ 0.81
SIPA1Q96FS4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SIPA1Q96FS4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
SIPA1Q96FS4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SIPA1Q96FS4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.08■□□□□ 0.81
SIPA1Q96FS4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SIPA1Q96FS4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SIPA1Q96FS4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SIPA1Q96FS4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.08■□□□□ 0.81
SIPA1Q96FS4 AP003071.4-201ENST00000562276 1284 ntBASIC20.08■□□□□ 0.81
SIPA1Q96FS4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.08■□□□□ 0.81
SIPA1Q96FS4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SIPA1Q96FS4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SIPA1Q96FS4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
SIPA1Q96FS4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SIPA1Q96FS4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SIPA1Q96FS4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.08■□□□□ 0.8
SIPA1Q96FS4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
SIPA1Q96FS4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SIPA1Q96FS4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SIPA1Q96FS4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SIPA1Q96FS4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SIPA1Q96FS4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SIPA1Q96FS4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.07■□□□□ 0.8
SIPA1Q96FS4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SIPA1Q96FS4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
SIPA1Q96FS4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 FAM197Y1-201ENST00000421178 764 ntBASIC20.06■□□□□ 0.8
SIPA1Q96FS4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 AC073195.1-201ENST00000607241 877 ntBASIC20.06■□□□□ 0.8
SIPA1Q96FS4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIPA1Q96FS4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.05■□□□□ 0.8
SIPA1Q96FS4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIPA1Q96FS4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIPA1Q96FS4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.05■□□□□ 0.8
SIPA1Q96FS4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIPA1Q96FS4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIPA1Q96FS4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIPA1Q96FS4 KRT8P17-201ENST00000453110 1448 ntBASIC20.05■□□□□ 0.8
SIPA1Q96FS4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SIPA1Q96FS4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SIPA1Q96FS4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
SIPA1Q96FS4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.05■□□□□ 0.8
SIPA1Q96FS4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
SIPA1Q96FS4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SIPA1Q96FS4 AF106564.1-201ENST00000607058 2553 ntBASIC20.05■□□□□ 0.8
SIPA1Q96FS4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIPA1Q96FS4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIPA1Q96FS4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SIPA1Q96FS4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIPA1Q96FS4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIPA1Q96FS4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
SIPA1Q96FS4 FP700111.2-201ENST00000619190 1892 ntBASIC20.05■□□□□ 0.8
SIPA1Q96FS4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SIPA1Q96FS4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIPA1Q96FS4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SIPA1Q96FS4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIPA1Q96FS4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SIPA1Q96FS4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.04■□□□□ 0.8
SIPA1Q96FS4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.04■□□□□ 0.8
SIPA1Q96FS4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SIPA1Q96FS4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms