Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.83■□□□□ 0.28
NEIL1Q96FI4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.83■□□□□ 0.28
NEIL1Q96FI4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
NEIL1Q96FI4 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.83■□□□□ 0.28
NEIL1Q96FI4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NEIL1Q96FI4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NEIL1Q96FI4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NEIL1Q96FI4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.83■□□□□ 0.28
NEIL1Q96FI4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NEIL1Q96FI4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEIL1Q96FI4 LINC01006-201ENST00000333319 2292 ntBASIC16.82■□□□□ 0.28
NEIL1Q96FI4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.82■□□□□ 0.28
NEIL1Q96FI4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NEIL1Q96FI4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NEIL1Q96FI4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEIL1Q96FI4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NEIL1Q96FI4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEIL1Q96FI4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEIL1Q96FI4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEIL1Q96FI4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NEIL1Q96FI4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.82■□□□□ 0.28
NEIL1Q96FI4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NEIL1Q96FI4 AP003097.1-201ENST00000530657 1135 ntBASIC16.82■□□□□ 0.28
NEIL1Q96FI4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NEIL1Q96FI4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.82■□□□□ 0.28
NEIL1Q96FI4 FP700111.2-201ENST00000619190 1892 ntBASIC16.82■□□□□ 0.28
NEIL1Q96FI4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
NEIL1Q96FI4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 AL390719.1-204ENST00000412397 1219 ntBASIC16.81■□□□□ 0.28
NEIL1Q96FI4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 AC026366.1-201ENST00000488803 879 ntBASIC16.81■□□□□ 0.28
NEIL1Q96FI4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 TMEM191A-211ENST00000637163 1067 ntBASIC16.81■□□□□ 0.28
NEIL1Q96FI4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEIL1Q96FI4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 KRT18P29-201ENST00000397031 1267 ntBASIC16.8■□□□□ 0.28
NEIL1Q96FI4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
NEIL1Q96FI4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NEIL1Q96FI4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.79■□□□□ 0.28
NEIL1Q96FI4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms