Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CCDC97Q96F63 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
CCDC97Q96F63 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CCDC97Q96F63 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC97Q96F63 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC97Q96F63 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.3■□□□□ 0.84
CCDC97Q96F63 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CCDC97Q96F63 FAM21FP-204ENST00000608637 956 ntBASIC20.3■□□□□ 0.84
CCDC97Q96F63 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC97Q96F63 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CCDC97Q96F63 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
CCDC97Q96F63 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC97Q96F63 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC97Q96F63 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC97Q96F63 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC97Q96F63 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC97Q96F63 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC97Q96F63 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC97Q96F63 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CCDC97Q96F63 AC073314.1-201ENST00000568729 2216 ntBASIC20.29■□□□□ 0.84
CCDC97Q96F63 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC97Q96F63 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC97Q96F63 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC97Q96F63 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC97Q96F63 AL355472.2-201ENST00000422958 438 ntBASIC20.29■□□□□ 0.84
CCDC97Q96F63 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.29■□□□□ 0.84
CCDC97Q96F63 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC97Q96F63 CDV3P1-201ENST00000471403 739 ntBASIC20.29■□□□□ 0.84
CCDC97Q96F63 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.29■□□□□ 0.84
CCDC97Q96F63 RNA5SP413-201ENST00000516373 109 ntBASIC20.29■□□□□ 0.84
CCDC97Q96F63 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC97Q96F63 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC97Q96F63 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC97Q96F63 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CCDC97Q96F63 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC97Q96F63 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC97Q96F63 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC97Q96F63 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
CCDC97Q96F63 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC97Q96F63 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC97Q96F63 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC97Q96F63 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
CCDC97Q96F63 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC97Q96F63 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC97Q96F63 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC97Q96F63 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC97Q96F63 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC97Q96F63 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC97Q96F63 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC97Q96F63 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC97Q96F63 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
CCDC97Q96F63 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CCDC97Q96F63 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC97Q96F63 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC97Q96F63 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC97Q96F63 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC97Q96F63 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC97Q96F63 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC97Q96F63 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC97Q96F63 AL162412.1-201ENST00000567129 965 ntBASIC20.28■□□□□ 0.84
CCDC97Q96F63 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CCDC97Q96F63 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC97Q96F63 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC97Q96F63 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC97Q96F63 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CCDC97Q96F63 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC97Q96F63 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC97Q96F63 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CCDC97Q96F63 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC97Q96F63 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC97Q96F63 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC97Q96F63 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC97Q96F63 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC97Q96F63 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC97Q96F63 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC97Q96F63 AC008694.1-202ENST00000636953 945 ntBASIC20.27■□□□□ 0.84
CCDC97Q96F63 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CCDC97Q96F63 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CCDC97Q96F63 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC97Q96F63 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC97Q96F63 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC97Q96F63 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC97Q96F63 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC97Q96F63 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.27■□□□□ 0.83
CCDC97Q96F63 MKRN4P-201ENST00000444706 1521 ntBASIC20.27■□□□□ 0.83
CCDC97Q96F63 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
CCDC97Q96F63 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CCDC97Q96F63 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CCDC97Q96F63 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC97Q96F63 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC97Q96F63 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC97Q96F63 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CCDC97Q96F63 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
CCDC97Q96F63 CYP21A1P-202ENST00000354927 1481 ntBASIC20.26■□□□□ 0.83
CCDC97Q96F63 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC97Q96F63 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CCDC97Q96F63 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CCDC97Q96F63 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC97Q96F63 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC97Q96F63 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms