Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
RTP4Q96DX8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTP4Q96DX8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.4■□□□□ 0.86
RTP4Q96DX8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.4■□□□□ 0.86
RTP4Q96DX8 AC093787.1-201ENST00000450396 207 ntBASIC20.4■□□□□ 0.86
RTP4Q96DX8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.4■□□□□ 0.86
RTP4Q96DX8 AC023632.3-201ENST00000521633 145 ntBASIC20.4■□□□□ 0.86
RTP4Q96DX8 C2orf69P4-201ENST00000565394 541 ntBASIC20.4■□□□□ 0.86
RTP4Q96DX8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.4■□□□□ 0.86
RTP4Q96DX8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.4■□□□□ 0.86
RTP4Q96DX8 AL050303.2-201ENST00000619798 666 ntBASIC20.4■□□□□ 0.86
RTP4Q96DX8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RTP4Q96DX8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RTP4Q96DX8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RTP4Q96DX8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.39■□□□□ 0.86
RTP4Q96DX8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.39■□□□□ 0.86
RTP4Q96DX8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
RTP4Q96DX8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RTP4Q96DX8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.39■□□□□ 0.86
RTP4Q96DX8 KRT17P1-201ENST00000399211 1546 ntBASIC20.39■□□□□ 0.85
RTP4Q96DX8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RTP4Q96DX8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.39■□□□□ 0.85
RTP4Q96DX8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.39■□□□□ 0.85
RTP4Q96DX8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RTP4Q96DX8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RTP4Q96DX8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RTP4Q96DX8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.39■□□□□ 0.85
RTP4Q96DX8 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
RTP4Q96DX8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.39■□□□□ 0.85
RTP4Q96DX8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.39■□□□□ 0.85
RTP4Q96DX8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RTP4Q96DX8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.39■□□□□ 0.85
RTP4Q96DX8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
RTP4Q96DX8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.39■□□□□ 0.85
RTP4Q96DX8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RTP4Q96DX8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.38■□□□□ 0.85
RTP4Q96DX8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTP4Q96DX8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTP4Q96DX8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
RTP4Q96DX8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTP4Q96DX8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTP4Q96DX8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTP4Q96DX8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTP4Q96DX8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTP4Q96DX8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTP4Q96DX8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.38■□□□□ 0.85
RTP4Q96DX8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTP4Q96DX8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTP4Q96DX8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTP4Q96DX8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.38■□□□□ 0.85
RTP4Q96DX8 AC133552.2-202ENST00000575694 574 ntBASIC20.38■□□□□ 0.85
RTP4Q96DX8 AC005181.1-201ENST00000604782 1256 ntBASIC20.38■□□□□ 0.85
RTP4Q96DX8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
RTP4Q96DX8 AL121832.2-201ENST00000610979 668 ntBASIC20.38■□□□□ 0.85
RTP4Q96DX8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.38■□□□□ 0.85
RTP4Q96DX8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.38■□□□□ 0.85
RTP4Q96DX8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTP4Q96DX8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTP4Q96DX8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTP4Q96DX8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTP4Q96DX8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.38■□□□□ 0.85
RTP4Q96DX8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RTP4Q96DX8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTP4Q96DX8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.37■□□□□ 0.85
RTP4Q96DX8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.37■□□□□ 0.85
RTP4Q96DX8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTP4Q96DX8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.37■□□□□ 0.85
RTP4Q96DX8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTP4Q96DX8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.37■□□□□ 0.85
RTP4Q96DX8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
RTP4Q96DX8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.37■□□□□ 0.85
RTP4Q96DX8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTP4Q96DX8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.37■□□□□ 0.85
RTP4Q96DX8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.37■□□□□ 0.85
RTP4Q96DX8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.37■□□□□ 0.85
RTP4Q96DX8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.37■□□□□ 0.85
RTP4Q96DX8 AP001271.2-201ENST00000624018 1556 ntBASIC20.37■□□□□ 0.85
RTP4Q96DX8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTP4Q96DX8 AC116562.4-201ENST00000641316 2276 ntBASIC20.37■□□□□ 0.85
RTP4Q96DX8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTP4Q96DX8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.36■□□□□ 0.85
RTP4Q96DX8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTP4Q96DX8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RTP4Q96DX8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTP4Q96DX8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTP4Q96DX8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTP4Q96DX8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
RTP4Q96DX8 HLA-G-202ENST00000376815 851 ntBASIC20.36■□□□□ 0.85
RTP4Q96DX8 HLA-G-203ENST00000376818 1127 ntBASIC20.36■□□□□ 0.85
RTP4Q96DX8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTP4Q96DX8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RTP4Q96DX8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.36■□□□□ 0.85
RTP4Q96DX8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
RTP4Q96DX8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.36■□□□□ 0.85
RTP4Q96DX8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTP4Q96DX8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTP4Q96DX8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTP4Q96DX8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTP4Q96DX8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTP4Q96DX8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms