Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.7■□□□□ 0.42
APH1AQ96BI3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
APH1AQ96BI3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APH1AQ96BI3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APH1AQ96BI3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
APH1AQ96BI3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APH1AQ96BI3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.7■□□□□ 0.42
APH1AQ96BI3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APH1AQ96BI3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APH1AQ96BI3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
APH1AQ96BI3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
APH1AQ96BI3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
APH1AQ96BI3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.7■□□□□ 0.42
APH1AQ96BI3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APH1AQ96BI3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APH1AQ96BI3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.69■□□□□ 0.42
APH1AQ96BI3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
APH1AQ96BI3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APH1AQ96BI3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APH1AQ96BI3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.69■□□□□ 0.42
APH1AQ96BI3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APH1AQ96BI3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APH1AQ96BI3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.69■□□□□ 0.42
APH1AQ96BI3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APH1AQ96BI3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APH1AQ96BI3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.69■□□□□ 0.42
APH1AQ96BI3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.69■□□□□ 0.42
APH1AQ96BI3 POM121L13P-201ENST00000422362 380 ntBASIC17.69■□□□□ 0.42
APH1AQ96BI3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.69■□□□□ 0.42
APH1AQ96BI3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.69■□□□□ 0.42
APH1AQ96BI3 AC006058.3-201ENST00000606217 1069 ntBASIC17.69■□□□□ 0.42
APH1AQ96BI3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APH1AQ96BI3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
APH1AQ96BI3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APH1AQ96BI3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.69■□□□□ 0.42
APH1AQ96BI3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
APH1AQ96BI3 KRT16P6-202ENST00000425692 1426 ntBASIC17.69■□□□□ 0.42
APH1AQ96BI3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.69■□□□□ 0.42
APH1AQ96BI3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APH1AQ96BI3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APH1AQ96BI3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APH1AQ96BI3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APH1AQ96BI3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
APH1AQ96BI3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
APH1AQ96BI3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
APH1AQ96BI3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APH1AQ96BI3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
APH1AQ96BI3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.68■□□□□ 0.42
APH1AQ96BI3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APH1AQ96BI3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APH1AQ96BI3 KRT18P29-201ENST00000397031 1267 ntBASIC17.68■□□□□ 0.42
APH1AQ96BI3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
APH1AQ96BI3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.68■□□□□ 0.42
APH1AQ96BI3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.68■□□□□ 0.42
APH1AQ96BI3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.68■□□□□ 0.42
APH1AQ96BI3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.68■□□□□ 0.42
APH1AQ96BI3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.68■□□□□ 0.42
APH1AQ96BI3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.68■□□□□ 0.42
APH1AQ96BI3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.68■□□□□ 0.42
APH1AQ96BI3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.68■□□□□ 0.42
APH1AQ96BI3 AC120498.8-201ENST00000614275 531 ntBASIC17.68■□□□□ 0.42
APH1AQ96BI3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APH1AQ96BI3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
APH1AQ96BI3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
APH1AQ96BI3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APH1AQ96BI3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APH1AQ96BI3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APH1AQ96BI3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.68■□□□□ 0.42
APH1AQ96BI3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.67■□□□□ 0.42
APH1AQ96BI3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APH1AQ96BI3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APH1AQ96BI3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APH1AQ96BI3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.67■□□□□ 0.42
APH1AQ96BI3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APH1AQ96BI3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APH1AQ96BI3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.67■□□□□ 0.42
APH1AQ96BI3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
APH1AQ96BI3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.67■□□□□ 0.42
APH1AQ96BI3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APH1AQ96BI3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APH1AQ96BI3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APH1AQ96BI3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.67■□□□□ 0.42
APH1AQ96BI3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APH1AQ96BI3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APH1AQ96BI3 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.67■□□□□ 0.42
APH1AQ96BI3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APH1AQ96BI3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.67■□□□□ 0.42
APH1AQ96BI3 ITM2C-210ENST00000620962 501 ntBASIC17.67■□□□□ 0.42
APH1AQ96BI3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.67■□□□□ 0.42
APH1AQ96BI3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
APH1AQ96BI3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
APH1AQ96BI3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
APH1AQ96BI3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APH1AQ96BI3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APH1AQ96BI3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APH1AQ96BI3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
APH1AQ96BI3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
APH1AQ96BI3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APH1AQ96BI3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
APH1AQ96BI3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms