Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
ZNF428Q96B54 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
ZNF428Q96B54 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC25.73■■□□□ 1.71
ZNF428Q96B54 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
ZNF428Q96B54 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
ZNF428Q96B54 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ZNF428Q96B54 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC25.73■■□□□ 1.71
ZNF428Q96B54 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
ZNF428Q96B54 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC25.73■■□□□ 1.71
ZNF428Q96B54 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ZNF428Q96B54 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ZNF428Q96B54 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC25.73■■□□□ 1.71
ZNF428Q96B54 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC25.73■■□□□ 1.71
ZNF428Q96B54 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ZNF428Q96B54 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ZNF428Q96B54 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC25.73■■□□□ 1.71
ZNF428Q96B54 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
ZNF428Q96B54 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
ZNF428Q96B54 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ZNF428Q96B54 KRT16P6-202ENST00000425692 1426 ntBASIC25.72■■□□□ 1.71
ZNF428Q96B54 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
ZNF428Q96B54 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ZNF428Q96B54 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ZNF428Q96B54 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ZNF428Q96B54 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
ZNF428Q96B54 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
ZNF428Q96B54 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC25.72■■□□□ 1.71
ZNF428Q96B54 USP36-216ENST00000589424 970 ntTSL 5 BASIC25.72■■□□□ 1.71
ZNF428Q96B54 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
ZNF428Q96B54 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
ZNF428Q96B54 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ZNF428Q96B54 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC25.71■■□□□ 1.71
ZNF428Q96B54 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
ZNF428Q96B54 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC25.71■■□□□ 1.71
ZNF428Q96B54 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC25.71■■□□□ 1.71
ZNF428Q96B54 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
ZNF428Q96B54 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ZNF428Q96B54 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
ZNF428Q96B54 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC25.71■■□□□ 1.71
ZNF428Q96B54 GGT1-206ENST00000404223 952 ntTSL 2 BASIC25.71■■□□□ 1.71
ZNF428Q96B54 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC25.71■■□□□ 1.71
ZNF428Q96B54 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
ZNF428Q96B54 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC25.71■■□□□ 1.71
ZNF428Q96B54 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC25.71■■□□□ 1.71
ZNF428Q96B54 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC25.71■■□□□ 1.71
ZNF428Q96B54 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ZNF428Q96B54 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
ZNF428Q96B54 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ZNF428Q96B54 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ZNF428Q96B54 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC25.7■■□□□ 1.7
ZNF428Q96B54 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
ZNF428Q96B54 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ZNF428Q96B54 THEM4-205ENST00000489410 643 ntTSL 2 BASIC25.7■■□□□ 1.7
ZNF428Q96B54 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC25.7■■□□□ 1.7
ZNF428Q96B54 RPPH1-201ENST00000516869 333 ntBASIC25.7■■□□□ 1.7
ZNF428Q96B54 TK2-204ENST00000525974 1178 ntTSL 2 BASIC25.7■■□□□ 1.7
ZNF428Q96B54 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC25.7■■□□□ 1.7
ZNF428Q96B54 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC25.7■■□□□ 1.7
ZNF428Q96B54 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
ZNF428Q96B54 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ZNF428Q96B54 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
ZNF428Q96B54 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ZNF428Q96B54 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC25.7■■□□□ 1.7
ZNF428Q96B54 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
ZNF428Q96B54 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC25.7■■□□□ 1.7
ZNF428Q96B54 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
ZNF428Q96B54 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
ZNF428Q96B54 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC25.69■■□□□ 1.7
ZNF428Q96B54 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ZNF428Q96B54 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
ZNF428Q96B54 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ZNF428Q96B54 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ZNF428Q96B54 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ZNF428Q96B54 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ZNF428Q96B54 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC25.69■■□□□ 1.7
ZNF428Q96B54 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ZNF428Q96B54 RPS2P4-201ENST00000476944 856 ntBASIC25.69■■□□□ 1.7
ZNF428Q96B54 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
ZNF428Q96B54 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC25.69■■□□□ 1.7
ZNF428Q96B54 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ZNF428Q96B54 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
ZNF428Q96B54 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC25.69■■□□□ 1.7
ZNF428Q96B54 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ZNF428Q96B54 TCF3P1-201ENST00000423021 1937 ntBASIC25.69■■□□□ 1.7
ZNF428Q96B54 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
ZNF428Q96B54 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZNF428Q96B54 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZNF428Q96B54 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC25.68■■□□□ 1.7
ZNF428Q96B54 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC25.68■■□□□ 1.7
ZNF428Q96B54 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC25.68■■□□□ 1.7
ZNF428Q96B54 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC25.68■■□□□ 1.7
ZNF428Q96B54 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC25.68■■□□□ 1.7
ZNF428Q96B54 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZNF428Q96B54 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZNF428Q96B54 AC069544.1-201ENST00000609399 999 ntBASIC25.68■■□□□ 1.7
ZNF428Q96B54 FAM197Y4-202ENST00000622692 608 ntBASIC25.68■■□□□ 1.7
ZNF428Q96B54 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZNF428Q96B54 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ZNF428Q96B54 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
ZNF428Q96B54 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms