Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
STAG1Q8WVM7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC23.58■■□□□ 1.37
STAG1Q8WVM7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
STAG1Q8WVM7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
STAG1Q8WVM7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
STAG1Q8WVM7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC23.58■■□□□ 1.37
STAG1Q8WVM7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
STAG1Q8WVM7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
STAG1Q8WVM7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
STAG1Q8WVM7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
STAG1Q8WVM7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.58■■□□□ 1.37
STAG1Q8WVM7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
STAG1Q8WVM7 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.58■■□□□ 1.37
STAG1Q8WVM7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC23.58■■□□□ 1.37
STAG1Q8WVM7 AC233263.1-201ENST00000578059 224 ntBASIC23.58■■□□□ 1.37
STAG1Q8WVM7 AC069544.1-201ENST00000609399 999 ntBASIC23.58■■□□□ 1.37
STAG1Q8WVM7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
STAG1Q8WVM7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
STAG1Q8WVM7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
STAG1Q8WVM7 AC099778.1-201ENST00000568593 1911 ntBASIC23.58■■□□□ 1.37
STAG1Q8WVM7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
STAG1Q8WVM7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.36
STAG1Q8WVM7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.58■■□□□ 1.36
STAG1Q8WVM7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
STAG1Q8WVM7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
STAG1Q8WVM7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
STAG1Q8WVM7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.36
STAG1Q8WVM7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
STAG1Q8WVM7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.57■■□□□ 1.36
STAG1Q8WVM7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
STAG1Q8WVM7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
STAG1Q8WVM7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC23.57■■□□□ 1.36
STAG1Q8WVM7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
STAG1Q8WVM7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
STAG1Q8WVM7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
STAG1Q8WVM7 KRT17P3-201ENST00000420566 1262 ntBASIC23.57■■□□□ 1.36
STAG1Q8WVM7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
STAG1Q8WVM7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
STAG1Q8WVM7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.57■■□□□ 1.36
STAG1Q8WVM7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC23.57■■□□□ 1.36
STAG1Q8WVM7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
STAG1Q8WVM7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.57■■□□□ 1.36
STAG1Q8WVM7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
STAG1Q8WVM7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
STAG1Q8WVM7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
STAG1Q8WVM7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
STAG1Q8WVM7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
STAG1Q8WVM7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
STAG1Q8WVM7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
STAG1Q8WVM7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
STAG1Q8WVM7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
STAG1Q8WVM7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
STAG1Q8WVM7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
STAG1Q8WVM7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.56■■□□□ 1.36
STAG1Q8WVM7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.56■■□□□ 1.36
STAG1Q8WVM7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC23.56■■□□□ 1.36
STAG1Q8WVM7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
STAG1Q8WVM7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
STAG1Q8WVM7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
STAG1Q8WVM7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
STAG1Q8WVM7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
STAG1Q8WVM7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
STAG1Q8WVM7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
STAG1Q8WVM7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.56■■□□□ 1.36
STAG1Q8WVM7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.55■■□□□ 1.36
STAG1Q8WVM7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
STAG1Q8WVM7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC23.55■■□□□ 1.36
STAG1Q8WVM7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
STAG1Q8WVM7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
STAG1Q8WVM7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
STAG1Q8WVM7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
STAG1Q8WVM7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
STAG1Q8WVM7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC23.55■■□□□ 1.36
STAG1Q8WVM7 AL158047.1-201ENST00000445918 881 ntBASIC23.55■■□□□ 1.36
STAG1Q8WVM7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
STAG1Q8WVM7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
STAG1Q8WVM7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC23.55■■□□□ 1.36
STAG1Q8WVM7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
STAG1Q8WVM7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
STAG1Q8WVM7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.55■■□□□ 1.36
STAG1Q8WVM7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
STAG1Q8WVM7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
STAG1Q8WVM7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
STAG1Q8WVM7 AL391422.3-201ENST00000603791 2761 ntBASIC23.55■■□□□ 1.36
STAG1Q8WVM7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC23.55■■□□□ 1.36
STAG1Q8WVM7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
STAG1Q8WVM7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
STAG1Q8WVM7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.55■■□□□ 1.36
STAG1Q8WVM7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
STAG1Q8WVM7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
STAG1Q8WVM7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
STAG1Q8WVM7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.54■■□□□ 1.36
STAG1Q8WVM7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
STAG1Q8WVM7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
STAG1Q8WVM7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
STAG1Q8WVM7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.54■■□□□ 1.36
STAG1Q8WVM7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
STAG1Q8WVM7 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.54■■□□□ 1.36
STAG1Q8WVM7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.54■■□□□ 1.36
STAG1Q8WVM7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms