Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SH3RF3Q8TEJ3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC23.81■■□□□ 1.4
SH3RF3Q8TEJ3 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.81■■□□□ 1.4
SH3RF3Q8TEJ3 TSPY15P-201ENST00000457163 923 ntBASIC23.81■■□□□ 1.4
SH3RF3Q8TEJ3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC23.81■■□□□ 1.4
SH3RF3Q8TEJ3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
SH3RF3Q8TEJ3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SH3RF3Q8TEJ3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SH3RF3Q8TEJ3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SH3RF3Q8TEJ3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
SH3RF3Q8TEJ3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SH3RF3Q8TEJ3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
SH3RF3Q8TEJ3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SH3RF3Q8TEJ3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.8■■□□□ 1.4
SH3RF3Q8TEJ3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.8■■□□□ 1.4
SH3RF3Q8TEJ3 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.8■■□□□ 1.4
SH3RF3Q8TEJ3 SMG8-203ENST00000578922 2178 ntBASIC23.8■■□□□ 1.4
SH3RF3Q8TEJ3 AP001412.1-201ENST00000608405 714 ntBASIC23.8■■□□□ 1.4
SH3RF3Q8TEJ3 AL137060.1-201ENST00000618151 2648 ntBASIC23.8■■□□□ 1.4
SH3RF3Q8TEJ3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.8■■□□□ 1.4
SH3RF3Q8TEJ3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SH3RF3Q8TEJ3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
SH3RF3Q8TEJ3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.8■■□□□ 1.4
SH3RF3Q8TEJ3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
SH3RF3Q8TEJ3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3RF3Q8TEJ3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3RF3Q8TEJ3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3RF3Q8TEJ3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3RF3Q8TEJ3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.79■■□□□ 1.4
SH3RF3Q8TEJ3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3RF3Q8TEJ3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3RF3Q8TEJ3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3RF3Q8TEJ3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3RF3Q8TEJ3 SAPCD2P4-201ENST00000424595 1171 ntBASIC23.79■■□□□ 1.4
SH3RF3Q8TEJ3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC23.79■■□□□ 1.4
SH3RF3Q8TEJ3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SH3RF3Q8TEJ3 AF186192.3-201ENST00000583427 947 ntBASIC23.79■■□□□ 1.4
SH3RF3Q8TEJ3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC23.79■■□□□ 1.4
SH3RF3Q8TEJ3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3RF3Q8TEJ3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3RF3Q8TEJ3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3RF3Q8TEJ3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3RF3Q8TEJ3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3RF3Q8TEJ3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3RF3Q8TEJ3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3RF3Q8TEJ3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SH3RF3Q8TEJ3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
SH3RF3Q8TEJ3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SH3RF3Q8TEJ3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
SH3RF3Q8TEJ3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC23.78■■□□□ 1.4
SH3RF3Q8TEJ3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.78■■□□□ 1.4
SH3RF3Q8TEJ3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SH3RF3Q8TEJ3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.78■■□□□ 1.4
SH3RF3Q8TEJ3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SH3RF3Q8TEJ3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.78■■□□□ 1.4
SH3RF3Q8TEJ3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.78■■□□□ 1.4
SH3RF3Q8TEJ3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SH3RF3Q8TEJ3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SH3RF3Q8TEJ3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SH3RF3Q8TEJ3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH3RF3Q8TEJ3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SH3RF3Q8TEJ3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.77■■□□□ 1.4
SH3RF3Q8TEJ3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH3RF3Q8TEJ3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH3RF3Q8TEJ3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC23.77■■□□□ 1.4
SH3RF3Q8TEJ3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.77■■□□□ 1.4
SH3RF3Q8TEJ3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC23.77■■□□□ 1.4
SH3RF3Q8TEJ3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.77■■□□□ 1.4
SH3RF3Q8TEJ3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH3RF3Q8TEJ3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.76■■□□□ 1.39
SH3RF3Q8TEJ3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SH3RF3Q8TEJ3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
SH3RF3Q8TEJ3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH3RF3Q8TEJ3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC23.76■■□□□ 1.39
SH3RF3Q8TEJ3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.76■■□□□ 1.39
SH3RF3Q8TEJ3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH3RF3Q8TEJ3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH3RF3Q8TEJ3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
SH3RF3Q8TEJ3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH3RF3Q8TEJ3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH3RF3Q8TEJ3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC23.76■■□□□ 1.39
SH3RF3Q8TEJ3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.76■■□□□ 1.39
SH3RF3Q8TEJ3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC23.76■■□□□ 1.39
SH3RF3Q8TEJ3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
SH3RF3Q8TEJ3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC23.76■■□□□ 1.39
SH3RF3Q8TEJ3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC23.76■■□□□ 1.39
SH3RF3Q8TEJ3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.76■■□□□ 1.39
SH3RF3Q8TEJ3 AC073912.3-201ENST00000624414 853 ntBASIC23.76■■□□□ 1.39
SH3RF3Q8TEJ3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
SH3RF3Q8TEJ3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH3RF3Q8TEJ3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SH3RF3Q8TEJ3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
SH3RF3Q8TEJ3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SH3RF3Q8TEJ3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SH3RF3Q8TEJ3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.75■■□□□ 1.39
SH3RF3Q8TEJ3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.75■■□□□ 1.39
SH3RF3Q8TEJ3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC23.75■■□□□ 1.39
SH3RF3Q8TEJ3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SH3RF3Q8TEJ3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SH3RF3Q8TEJ3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms