Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH3RF2Q8TEC5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.77■□□□□ 0.92
SH3RF2Q8TEC5 AL157384.1-201ENST00000445995 2473 ntBASIC20.77■□□□□ 0.92
SH3RF2Q8TEC5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.77■□□□□ 0.92
SH3RF2Q8TEC5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH3RF2Q8TEC5 HLA-G-202ENST00000376815 851 ntBASIC20.77■□□□□ 0.92
SH3RF2Q8TEC5 HLA-G-203ENST00000376818 1127 ntBASIC20.77■□□□□ 0.92
SH3RF2Q8TEC5 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SH3RF2Q8TEC5 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SH3RF2Q8TEC5 TSPY7P-201ENST00000431358 1114 ntBASIC20.77■□□□□ 0.92
SH3RF2Q8TEC5 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH3RF2Q8TEC5 RARRES2P10-201ENST00000564312 460 ntBASIC20.77■□□□□ 0.92
SH3RF2Q8TEC5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SH3RF2Q8TEC5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SH3RF2Q8TEC5 FP700111.2-201ENST00000619190 1892 ntBASIC20.77■□□□□ 0.92
SH3RF2Q8TEC5 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH3RF2Q8TEC5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH3RF2Q8TEC5 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH3RF2Q8TEC5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SH3RF2Q8TEC5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH3RF2Q8TEC5 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH3RF2Q8TEC5 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SH3RF2Q8TEC5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
SH3RF2Q8TEC5 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.76■□□□□ 0.91
SH3RF2Q8TEC5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SH3RF2Q8TEC5 AP001412.1-201ENST00000608405 714 ntBASIC20.76■□□□□ 0.91
SH3RF2Q8TEC5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH3RF2Q8TEC5 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.76■□□□□ 0.91
SH3RF2Q8TEC5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SH3RF2Q8TEC5 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH3RF2Q8TEC5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH3RF2Q8TEC5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 AL121906.2-201ENST00000621597 723 ntBASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SH3RF2Q8TEC5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SH3RF2Q8TEC5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF2Q8TEC5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.74■□□□□ 0.91
SH3RF2Q8TEC5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SH3RF2Q8TEC5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.74■□□□□ 0.91
SH3RF2Q8TEC5 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.74■□□□□ 0.91
SH3RF2Q8TEC5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.74■□□□□ 0.91
SH3RF2Q8TEC5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF2Q8TEC5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF2Q8TEC5 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.74■□□□□ 0.91
SH3RF2Q8TEC5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.74■□□□□ 0.91
SH3RF2Q8TEC5 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF2Q8TEC5 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.74■□□□□ 0.91
SH3RF2Q8TEC5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF2Q8TEC5 AC113410.3-201ENST00000623366 203 ntBASIC20.74■□□□□ 0.91
SH3RF2Q8TEC5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3RF2Q8TEC5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF2Q8TEC5 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
SH3RF2Q8TEC5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF2Q8TEC5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF2Q8TEC5 KRT8P20-201ENST00000423953 1409 ntBASIC20.73■□□□□ 0.91
SH3RF2Q8TEC5 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.73■□□□□ 0.91
SH3RF2Q8TEC5 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SH3RF2Q8TEC5 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.73■□□□□ 0.91
SH3RF2Q8TEC5 AL031963.3-201ENST00000606441 850 ntBASIC20.73■□□□□ 0.91
SH3RF2Q8TEC5 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.73■□□□□ 0.91
SH3RF2Q8TEC5 AC073912.3-201ENST00000624414 853 ntBASIC20.73■□□□□ 0.91
SH3RF2Q8TEC5 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF2Q8TEC5 NBPF21P-201ENST00000425093 1451 ntBASIC20.73■□□□□ 0.91
SH3RF2Q8TEC5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF2Q8TEC5 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.73■□□□□ 0.91
SH3RF2Q8TEC5 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SH3RF2Q8TEC5 AC006128.1-201ENST00000624704 1661 ntBASIC20.73■□□□□ 0.91
SH3RF2Q8TEC5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
SH3RF2Q8TEC5 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SH3RF2Q8TEC5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH3RF2Q8TEC5 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF2Q8TEC5 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.72■□□□□ 0.91
SH3RF2Q8TEC5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.72■□□□□ 0.91
SH3RF2Q8TEC5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF2Q8TEC5 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms