Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS4Y2Q8TD47 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 AC004408.2-201ENST00000623613 2777 ntBASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 AC004854.2-201ENST00000608450 1441 ntBASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.47■□□□□ 0.39
RPS4Y2Q8TD47 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 CYP21A1P-202ENST00000354927 1481 ntBASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.46■□□□□ 0.39
RPS4Y2Q8TD47 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RPS4Y2Q8TD47 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RPS4Y2Q8TD47 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RPS4Y2Q8TD47 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.45■□□□□ 0.38
RPS4Y2Q8TD47 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPS4Y2Q8TD47 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.45■□□□□ 0.38
RPS4Y2Q8TD47 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.45■□□□□ 0.38
RPS4Y2Q8TD47 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPS4Y2Q8TD47 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.45■□□□□ 0.38
RPS4Y2Q8TD47 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
RPS4Y2Q8TD47 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.45■□□□□ 0.38
RPS4Y2Q8TD47 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.45■□□□□ 0.38
RPS4Y2Q8TD47 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RPS4Y2Q8TD47 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPS4Y2Q8TD47 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPS4Y2Q8TD47 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.45■□□□□ 0.38
RPS4Y2Q8TD47 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPS4Y2Q8TD47 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RPS4Y2Q8TD47 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPS4Y2Q8TD47 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms