Protein–RNA interactions for Protein: Q8NG06

TRIM58, E3 ubiquitin-protein ligase TRIM58, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58Q8NG06 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM58Q8NG06 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TRIM58Q8NG06 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM58Q8NG06 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
TRIM58Q8NG06 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM58Q8NG06 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM58Q8NG06 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM58Q8NG06 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM58Q8NG06 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.21■□□□□ 0.99
TRIM58Q8NG06 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM58Q8NG06 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM58Q8NG06 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TRIM58Q8NG06 AC097381.1-201ENST00000429019 1296 ntBASIC21.21■□□□□ 0.99
TRIM58Q8NG06 CDV3P1-201ENST00000471403 739 ntBASIC21.21■□□□□ 0.99
TRIM58Q8NG06 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM58Q8NG06 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM58Q8NG06 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM58Q8NG06 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM58Q8NG06 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM58Q8NG06 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.21■□□□□ 0.99
TRIM58Q8NG06 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM58Q8NG06 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
TRIM58Q8NG06 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.99
TRIM58Q8NG06 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM58Q8NG06 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM58Q8NG06 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM58Q8NG06 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM58Q8NG06 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM58Q8NG06 LINC02228-203ENST00000641970 1355 ntBASIC21.2■□□□□ 0.98
TRIM58Q8NG06 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM58Q8NG06 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM58Q8NG06 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TRIM58Q8NG06 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM58Q8NG06 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM58Q8NG06 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM58Q8NG06 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM58Q8NG06 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM58Q8NG06 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM58Q8NG06 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM58Q8NG06 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM58Q8NG06 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRIM58Q8NG06 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM58Q8NG06 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM58Q8NG06 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.19■□□□□ 0.98
TRIM58Q8NG06 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM58Q8NG06 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM58Q8NG06 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
TRIM58Q8NG06 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TRIM58Q8NG06 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.19■□□□□ 0.98
TRIM58Q8NG06 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM58Q8NG06 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TRIM58Q8NG06 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM58Q8NG06 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM58Q8NG06 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM58Q8NG06 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.18■□□□□ 0.98
TRIM58Q8NG06 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.18■□□□□ 0.98
TRIM58Q8NG06 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
TRIM58Q8NG06 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM58Q8NG06 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM58Q8NG06 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM58Q8NG06 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM58Q8NG06 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM58Q8NG06 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM58Q8NG06 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TRIM58Q8NG06 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM58Q8NG06 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM58Q8NG06 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM58Q8NG06 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
TRIM58Q8NG06 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
TRIM58Q8NG06 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM58Q8NG06 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM58Q8NG06 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM58Q8NG06 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM58Q8NG06 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM58Q8NG06 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM58Q8NG06 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.17■□□□□ 0.98
TRIM58Q8NG06 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM58Q8NG06 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.17■□□□□ 0.98
TRIM58Q8NG06 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM58Q8NG06 AL356652.1-201ENST00000615962 565 ntBASIC21.17■□□□□ 0.98
TRIM58Q8NG06 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM58Q8NG06 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM58Q8NG06 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TRIM58Q8NG06 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM58Q8NG06 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM58Q8NG06 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM58Q8NG06 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM58Q8NG06 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM58Q8NG06 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM58Q8NG06 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM58Q8NG06 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM58Q8NG06 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM58Q8NG06 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM58Q8NG06 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM58Q8NG06 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM58Q8NG06 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM58Q8NG06 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM58Q8NG06 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TRIM58Q8NG06 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM58Q8NG06 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms