Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC24.73■■□□□ 1.55
RTL9Q8NET4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RTL9Q8NET4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC24.73■■□□□ 1.55
RTL9Q8NET4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
RTL9Q8NET4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
RTL9Q8NET4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RTL9Q8NET4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC24.73■■□□□ 1.55
RTL9Q8NET4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC24.73■■□□□ 1.55
RTL9Q8NET4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RTL9Q8NET4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RTL9Q8NET4 WWC2-AS2-201ENST00000578387 2183 ntBASIC24.72■■□□□ 1.55
RTL9Q8NET4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
RTL9Q8NET4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC24.72■■□□□ 1.55
RTL9Q8NET4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC24.72■■□□□ 1.55
RTL9Q8NET4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
RTL9Q8NET4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
RTL9Q8NET4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.72■■□□□ 1.55
RTL9Q8NET4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
RTL9Q8NET4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
RTL9Q8NET4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RTL9Q8NET4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RTL9Q8NET4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC24.72■■□□□ 1.55
RTL9Q8NET4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTL9Q8NET4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC24.71■■□□□ 1.55
RTL9Q8NET4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTL9Q8NET4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTL9Q8NET4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC24.71■■□□□ 1.55
RTL9Q8NET4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC24.71■■□□□ 1.55
RTL9Q8NET4 AC004264.1-201ENST00000608354 794 ntBASIC24.71■■□□□ 1.55
RTL9Q8NET4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTL9Q8NET4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
RTL9Q8NET4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTL9Q8NET4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
RTL9Q8NET4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTL9Q8NET4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
RTL9Q8NET4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC24.7■■□□□ 1.55
RTL9Q8NET4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
RTL9Q8NET4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.55
RTL9Q8NET4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
RTL9Q8NET4 AC026471.5-201ENST00000615068 467 ntBASIC24.7■■□□□ 1.55
RTL9Q8NET4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
RTL9Q8NET4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RTL9Q8NET4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC24.69■■□□□ 1.54
RTL9Q8NET4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC24.69■■□□□ 1.54
RTL9Q8NET4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC24.69■■□□□ 1.54
RTL9Q8NET4 CD177P1-201ENST00000606252 935 ntBASIC24.69■■□□□ 1.54
RTL9Q8NET4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RTL9Q8NET4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RTL9Q8NET4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC24.69■■□□□ 1.54
RTL9Q8NET4 DPP3P2-201ENST00000416030 1696 ntBASIC24.69■■□□□ 1.54
RTL9Q8NET4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC24.69■■□□□ 1.54
RTL9Q8NET4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RTL9Q8NET4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC24.69■■□□□ 1.54
RTL9Q8NET4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RTL9Q8NET4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
RTL9Q8NET4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC24.68■■□□□ 1.54
RTL9Q8NET4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTL9Q8NET4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
RTL9Q8NET4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTL9Q8NET4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RTL9Q8NET4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC24.68■■□□□ 1.54
RTL9Q8NET4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTL9Q8NET4 AC073195.1-201ENST00000607241 877 ntBASIC24.68■■□□□ 1.54
RTL9Q8NET4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTL9Q8NET4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTL9Q8NET4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC24.68■■□□□ 1.54
RTL9Q8NET4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTL9Q8NET4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTL9Q8NET4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RTL9Q8NET4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
RTL9Q8NET4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTL9Q8NET4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RTL9Q8NET4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTL9Q8NET4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTL9Q8NET4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RTL9Q8NET4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RTL9Q8NET4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTL9Q8NET4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
RTL9Q8NET4 TK2-213ENST00000563369 882 ntTSL 5 BASIC24.67■■□□□ 1.54
RTL9Q8NET4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC24.67■■□□□ 1.54
RTL9Q8NET4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTL9Q8NET4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RTL9Q8NET4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RTL9Q8NET4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTL9Q8NET4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTL9Q8NET4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTL9Q8NET4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC24.67■■□□□ 1.54
RTL9Q8NET4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTL9Q8NET4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC24.66■■□□□ 1.54
RTL9Q8NET4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC24.66■■□□□ 1.54
RTL9Q8NET4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC24.66■■□□□ 1.54
RTL9Q8NET4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC24.66■■□□□ 1.54
RTL9Q8NET4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RTL9Q8NET4 AC116351.2-201ENST00000606540 1585 ntBASIC24.66■■□□□ 1.54
RTL9Q8NET4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.66■■□□□ 1.54
RTL9Q8NET4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.66■■□□□ 1.54
RTL9Q8NET4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.66■■□□□ 1.54
RTL9Q8NET4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RTL9Q8NET4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC24.66■■□□□ 1.54
RTL9Q8NET4 AP003071.4-201ENST00000562276 1284 ntBASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms