Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TTC39CQ8N584 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.26■□□□□ 0.99
TTC39CQ8N584 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TTC39CQ8N584 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.25■□□□□ 0.99
TTC39CQ8N584 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TTC39CQ8N584 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TTC39CQ8N584 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TTC39CQ8N584 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TTC39CQ8N584 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TTC39CQ8N584 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TTC39CQ8N584 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
TTC39CQ8N584 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TTC39CQ8N584 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TTC39CQ8N584 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TTC39CQ8N584 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TTC39CQ8N584 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TTC39CQ8N584 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TTC39CQ8N584 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TTC39CQ8N584 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.25■□□□□ 0.99
TTC39CQ8N584 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
TTC39CQ8N584 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TTC39CQ8N584 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
TTC39CQ8N584 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TTC39CQ8N584 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TTC39CQ8N584 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.25■□□□□ 0.99
TTC39CQ8N584 AC099778.1-201ENST00000568593 1911 ntBASIC21.25■□□□□ 0.99
TTC39CQ8N584 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TTC39CQ8N584 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TTC39CQ8N584 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TTC39CQ8N584 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TTC39CQ8N584 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TTC39CQ8N584 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
TTC39CQ8N584 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.24■□□□□ 0.99
TTC39CQ8N584 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TTC39CQ8N584 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
TTC39CQ8N584 AC026366.1-201ENST00000488803 879 ntBASIC21.24■□□□□ 0.99
TTC39CQ8N584 AP003097.1-201ENST00000530657 1135 ntBASIC21.24■□□□□ 0.99
TTC39CQ8N584 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.24■□□□□ 0.99
TTC39CQ8N584 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TTC39CQ8N584 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.24■□□□□ 0.99
TTC39CQ8N584 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TTC39CQ8N584 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.24■□□□□ 0.99
TTC39CQ8N584 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TTC39CQ8N584 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TTC39CQ8N584 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.24■□□□□ 0.99
TTC39CQ8N584 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TTC39CQ8N584 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TTC39CQ8N584 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TTC39CQ8N584 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TTC39CQ8N584 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39CQ8N584 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39CQ8N584 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.23■□□□□ 0.99
TTC39CQ8N584 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39CQ8N584 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39CQ8N584 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TTC39CQ8N584 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.23■□□□□ 0.99
TTC39CQ8N584 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.23■□□□□ 0.99
TTC39CQ8N584 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39CQ8N584 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39CQ8N584 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.23■□□□□ 0.99
TTC39CQ8N584 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.23■□□□□ 0.99
TTC39CQ8N584 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39CQ8N584 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39CQ8N584 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39CQ8N584 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39CQ8N584 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39CQ8N584 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39CQ8N584 PHGDH-210ENST00000641115 1638 ntBASIC21.22■□□□□ 0.99
TTC39CQ8N584 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.22■□□□□ 0.99
TTC39CQ8N584 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.22■□□□□ 0.99
TTC39CQ8N584 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TTC39CQ8N584 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TTC39CQ8N584 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TTC39CQ8N584 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TTC39CQ8N584 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TTC39CQ8N584 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TTC39CQ8N584 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TTC39CQ8N584 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TTC39CQ8N584 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TTC39CQ8N584 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.22■□□□□ 0.99
TTC39CQ8N584 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TTC39CQ8N584 POM121L13P-201ENST00000422362 380 ntBASIC21.22■□□□□ 0.99
TTC39CQ8N584 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.22■□□□□ 0.99
TTC39CQ8N584 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TTC39CQ8N584 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.22■□□□□ 0.99
TTC39CQ8N584 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
TTC39CQ8N584 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TTC39CQ8N584 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TTC39CQ8N584 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TTC39CQ8N584 AP001271.2-201ENST00000624018 1556 ntBASIC21.22■□□□□ 0.99
TTC39CQ8N584 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.22■□□□□ 0.99
TTC39CQ8N584 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TTC39CQ8N584 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
TTC39CQ8N584 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC39CQ8N584 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TTC39CQ8N584 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TTC39CQ8N584 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.21■□□□□ 0.99
TTC39CQ8N584 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
TTC39CQ8N584 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.21■□□□□ 0.99
TTC39CQ8N584 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms