Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SIX5Q8N196 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.48■□□□□ 0.87
SIX5Q8N196 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIX5Q8N196 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIX5Q8N196 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIX5Q8N196 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SIX5Q8N196 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.48■□□□□ 0.87
SIX5Q8N196 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.48■□□□□ 0.87
SIX5Q8N196 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.48■□□□□ 0.87
SIX5Q8N196 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIX5Q8N196 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.48■□□□□ 0.87
SIX5Q8N196 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIX5Q8N196 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.48■□□□□ 0.87
SIX5Q8N196 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.48■□□□□ 0.87
SIX5Q8N196 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIX5Q8N196 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIX5Q8N196 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIX5Q8N196 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIX5Q8N196 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SIX5Q8N196 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SIX5Q8N196 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIX5Q8N196 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIX5Q8N196 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.47■□□□□ 0.87
SIX5Q8N196 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIX5Q8N196 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SIX5Q8N196 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIX5Q8N196 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIX5Q8N196 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.47■□□□□ 0.87
SIX5Q8N196 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIX5Q8N196 AL358472.4-201ENST00000633140 710 ntBASIC20.47■□□□□ 0.87
SIX5Q8N196 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SIX5Q8N196 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.47■□□□□ 0.87
SIX5Q8N196 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.47■□□□□ 0.87
SIX5Q8N196 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.47■□□□□ 0.87
SIX5Q8N196 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIX5Q8N196 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.46■□□□□ 0.87
SIX5Q8N196 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIX5Q8N196 C9orf163-202ENST00000624034 2573 ntBASIC20.46■□□□□ 0.87
SIX5Q8N196 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SIX5Q8N196 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIX5Q8N196 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIX5Q8N196 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.46■□□□□ 0.87
SIX5Q8N196 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.46■□□□□ 0.87
SIX5Q8N196 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIX5Q8N196 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIX5Q8N196 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIX5Q8N196 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIX5Q8N196 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.46■□□□□ 0.87
SIX5Q8N196 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIX5Q8N196 ECEL1P2-202ENST00000465689 757 ntBASIC20.46■□□□□ 0.87
SIX5Q8N196 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SIX5Q8N196 AL121603.2-201ENST00000557373 2117 ntBASIC20.46■□□□□ 0.87
SIX5Q8N196 C2orf69P3-201ENST00000565542 1120 ntBASIC20.46■□□□□ 0.87
SIX5Q8N196 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SIX5Q8N196 AC091076.1-201ENST00000610741 619 ntBASIC20.46■□□□□ 0.87
SIX5Q8N196 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIX5Q8N196 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIX5Q8N196 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SIX5Q8N196 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.46■□□□□ 0.87
SIX5Q8N196 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.46■□□□□ 0.87
SIX5Q8N196 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIX5Q8N196 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
SIX5Q8N196 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SIX5Q8N196 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
SIX5Q8N196 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SIX5Q8N196 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.45■□□□□ 0.86
SIX5Q8N196 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SIX5Q8N196 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.45■□□□□ 0.86
SIX5Q8N196 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.45■□□□□ 0.86
SIX5Q8N196 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.45■□□□□ 0.86
SIX5Q8N196 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SIX5Q8N196 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.45■□□□□ 0.86
SIX5Q8N196 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.45■□□□□ 0.86
SIX5Q8N196 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.45■□□□□ 0.86
SIX5Q8N196 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.45■□□□□ 0.86
SIX5Q8N196 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.45■□□□□ 0.86
SIX5Q8N196 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.45■□□□□ 0.86
SIX5Q8N196 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SIX5Q8N196 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SIX5Q8N196 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SIX5Q8N196 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.45■□□□□ 0.86
SIX5Q8N196 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SIX5Q8N196 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SIX5Q8N196 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIX5Q8N196 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SIX5Q8N196 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
SIX5Q8N196 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIX5Q8N196 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SIX5Q8N196 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SIX5Q8N196 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.44■□□□□ 0.86
SIX5Q8N196 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.44■□□□□ 0.86
SIX5Q8N196 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIX5Q8N196 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SIX5Q8N196 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.44■□□□□ 0.86
SIX5Q8N196 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIX5Q8N196 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIX5Q8N196 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SIX5Q8N196 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SIX5Q8N196 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SIX5Q8N196 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms