Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.52■■□□□ 1.03
NPAS4Q8IUM7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
NPAS4Q8IUM7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NPAS4Q8IUM7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.52■■□□□ 1.03
NPAS4Q8IUM7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NPAS4Q8IUM7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NPAS4Q8IUM7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NPAS4Q8IUM7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NPAS4Q8IUM7 FEM1AP4-201ENST00000443167 1987 ntBASIC21.51■■□□□ 1.03
NPAS4Q8IUM7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.51■■□□□ 1.03
NPAS4Q8IUM7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NPAS4Q8IUM7 AC005521.1-201ENST00000393351 872 ntBASIC21.51■■□□□ 1.03
NPAS4Q8IUM7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.51■■□□□ 1.03
NPAS4Q8IUM7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.51■■□□□ 1.03
NPAS4Q8IUM7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NPAS4Q8IUM7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.51■■□□□ 1.03
NPAS4Q8IUM7 KRT18P35-201ENST00000510488 1269 ntBASIC21.51■■□□□ 1.03
NPAS4Q8IUM7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.51■■□□□ 1.03
NPAS4Q8IUM7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.51■■□□□ 1.03
NPAS4Q8IUM7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
NPAS4Q8IUM7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
NPAS4Q8IUM7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NPAS4Q8IUM7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.51■■□□□ 1.03
NPAS4Q8IUM7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.51■■□□□ 1.03
NPAS4Q8IUM7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.51■■□□□ 1.03
NPAS4Q8IUM7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NPAS4Q8IUM7 PLK5-205ENST00000642079 1969 ntBASIC21.5■■□□□ 1.03
NPAS4Q8IUM7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.5■■□□□ 1.03
NPAS4Q8IUM7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NPAS4Q8IUM7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NPAS4Q8IUM7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NPAS4Q8IUM7 AC113347.1-201ENST00000413321 391 ntBASIC21.5■■□□□ 1.03
NPAS4Q8IUM7 AL390955.1-201ENST00000428694 934 ntBASIC21.5■■□□□ 1.03
NPAS4Q8IUM7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.5■■□□□ 1.03
NPAS4Q8IUM7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NPAS4Q8IUM7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.5■■□□□ 1.03
NPAS4Q8IUM7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.5■■□□□ 1.03
NPAS4Q8IUM7 AL049597.2-201ENST00000565575 961 ntBASIC21.5■■□□□ 1.03
NPAS4Q8IUM7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
NPAS4Q8IUM7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NPAS4Q8IUM7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
NPAS4Q8IUM7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
NPAS4Q8IUM7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.5■■□□□ 1.03
NPAS4Q8IUM7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NPAS4Q8IUM7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.5■■□□□ 1.03
NPAS4Q8IUM7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NPAS4Q8IUM7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.49■■□□□ 1.03
NPAS4Q8IUM7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.49■■□□□ 1.03
NPAS4Q8IUM7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NPAS4Q8IUM7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NPAS4Q8IUM7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NPAS4Q8IUM7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.49■■□□□ 1.03
NPAS4Q8IUM7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.49■■□□□ 1.03
NPAS4Q8IUM7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.49■■□□□ 1.03
NPAS4Q8IUM7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.49■■□□□ 1.03
NPAS4Q8IUM7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NPAS4Q8IUM7 AL590326.2-201ENST00000625139 305 ntBASIC21.49■■□□□ 1.03
NPAS4Q8IUM7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NPAS4Q8IUM7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NPAS4Q8IUM7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NPAS4Q8IUM7 CYP2D8P-201ENST00000433633 1490 ntBASIC21.49■■□□□ 1.03
NPAS4Q8IUM7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
NPAS4Q8IUM7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
NPAS4Q8IUM7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NPAS4Q8IUM7 KRT18P22-201ENST00000402024 1347 ntBASIC21.49■■□□□ 1.03
NPAS4Q8IUM7 AP006587.1-201ENST00000534129 1502 ntBASIC21.49■■□□□ 1.03
NPAS4Q8IUM7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
NPAS4Q8IUM7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NPAS4Q8IUM7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.48■■□□□ 1.03
NPAS4Q8IUM7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPAS4Q8IUM7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPAS4Q8IUM7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NPAS4Q8IUM7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
NPAS4Q8IUM7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPAS4Q8IUM7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPAS4Q8IUM7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPAS4Q8IUM7 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.48■■□□□ 1.03
NPAS4Q8IUM7 C1QL1P1-201ENST00000568105 661 ntBASIC21.48■■□□□ 1.03
NPAS4Q8IUM7 AC010947.1-201ENST00000623454 693 ntBASIC21.48■■□□□ 1.03
NPAS4Q8IUM7 AL031985.4-201ENST00000642138 673 ntBASIC21.48■■□□□ 1.03
NPAS4Q8IUM7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPAS4Q8IUM7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.48■■□□□ 1.03
NPAS4Q8IUM7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPAS4Q8IUM7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.48■■□□□ 1.03
NPAS4Q8IUM7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPAS4Q8IUM7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
NPAS4Q8IUM7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.47■■□□□ 1.03
NPAS4Q8IUM7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.47■■□□□ 1.03
NPAS4Q8IUM7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.47■■□□□ 1.03
NPAS4Q8IUM7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.47■■□□□ 1.03
NPAS4Q8IUM7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
NPAS4Q8IUM7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NPAS4Q8IUM7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NPAS4Q8IUM7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.47■■□□□ 1.03
NPAS4Q8IUM7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.47■■□□□ 1.03
NPAS4Q8IUM7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NPAS4Q8IUM7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NPAS4Q8IUM7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.47■■□□□ 1.03
NPAS4Q8IUM7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.46■■□□□ 1.03
NPAS4Q8IUM7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms