Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
COL23A1Q86Y22 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL23A1Q86Y22 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC25.26■■□□□ 1.63
COL23A1Q86Y22 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC25.26■■□□□ 1.63
COL23A1Q86Y22 CD320-202ENST00000537716 1119 ntTSL 2 BASIC25.26■■□□□ 1.63
COL23A1Q86Y22 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL23A1Q86Y22 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
COL23A1Q86Y22 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC25.26■■□□□ 1.63
COL23A1Q86Y22 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
COL23A1Q86Y22 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL23A1Q86Y22 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
COL23A1Q86Y22 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC25.25■■□□□ 1.63
COL23A1Q86Y22 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC25.25■■□□□ 1.63
COL23A1Q86Y22 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
COL23A1Q86Y22 HLA-G-202ENST00000376815 851 ntBASIC25.25■■□□□ 1.63
COL23A1Q86Y22 HLA-G-203ENST00000376818 1127 ntBASIC25.25■■□□□ 1.63
COL23A1Q86Y22 CD70-202ENST00000423145 881 ntTSL 2 BASIC25.25■■□□□ 1.63
COL23A1Q86Y22 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC25.25■■□□□ 1.63
COL23A1Q86Y22 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC25.25■■□□□ 1.63
COL23A1Q86Y22 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
COL23A1Q86Y22 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.25■■□□□ 1.63
COL23A1Q86Y22 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.25■■□□□ 1.63
COL23A1Q86Y22 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL23A1Q86Y22 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL23A1Q86Y22 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL23A1Q86Y22 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
COL23A1Q86Y22 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC25.24■■□□□ 1.63
COL23A1Q86Y22 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
COL23A1Q86Y22 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
COL23A1Q86Y22 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL23A1Q86Y22 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
COL23A1Q86Y22 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC25.24■■□□□ 1.63
COL23A1Q86Y22 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC25.24■■□□□ 1.63
COL23A1Q86Y22 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC25.24■■□□□ 1.63
COL23A1Q86Y22 AC093458.2-201ENST00000623150 629 ntBASIC25.24■■□□□ 1.63
COL23A1Q86Y22 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL23A1Q86Y22 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL23A1Q86Y22 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
COL23A1Q86Y22 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.23■■□□□ 1.63
COL23A1Q86Y22 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL23A1Q86Y22 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
COL23A1Q86Y22 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL23A1Q86Y22 BET1L-202ENST00000332865 533 ntTSL 5 BASIC25.23■■□□□ 1.63
COL23A1Q86Y22 HIST1H2APS4-201ENST00000362070 348 ntBASIC25.23■■□□□ 1.63
COL23A1Q86Y22 FAM207BP-201ENST00000447172 505 ntBASIC25.23■■□□□ 1.63
COL23A1Q86Y22 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
COL23A1Q86Y22 SLC25A1P4-201ENST00000567977 778 ntBASIC25.23■■□□□ 1.63
COL23A1Q86Y22 AL121956.5-201ENST00000625261 221 ntBASIC25.23■■□□□ 1.63
COL23A1Q86Y22 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.23■■□□□ 1.63
COL23A1Q86Y22 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
COL23A1Q86Y22 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.23■■□□□ 1.63
COL23A1Q86Y22 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
COL23A1Q86Y22 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL23A1Q86Y22 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL23A1Q86Y22 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL23A1Q86Y22 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
COL23A1Q86Y22 AC092647.4-201ENST00000457211 535 ntBASIC25.22■■□□□ 1.63
COL23A1Q86Y22 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
COL23A1Q86Y22 COX11P1-201ENST00000489116 835 ntBASIC25.22■■□□□ 1.63
COL23A1Q86Y22 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC25.22■■□□□ 1.63
COL23A1Q86Y22 AC130371.2-201ENST00000619443 611 ntBASIC25.22■■□□□ 1.63
COL23A1Q86Y22 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL23A1Q86Y22 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL23A1Q86Y22 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL23A1Q86Y22 GOLGA2P6-201ENST00000340929 2049 ntBASIC25.22■■□□□ 1.63
COL23A1Q86Y22 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
COL23A1Q86Y22 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC25.21■■□□□ 1.63
COL23A1Q86Y22 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL23A1Q86Y22 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
COL23A1Q86Y22 IER3-202ENST00000376377 1350 ntBASIC25.21■■□□□ 1.63
COL23A1Q86Y22 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL23A1Q86Y22 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC25.21■■□□□ 1.63
COL23A1Q86Y22 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
COL23A1Q86Y22 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL23A1Q86Y22 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
COL23A1Q86Y22 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
COL23A1Q86Y22 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
COL23A1Q86Y22 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC25.21■■□□□ 1.63
COL23A1Q86Y22 AP000692.2-201ENST00000608391 879 ntBASIC25.21■■□□□ 1.63
COL23A1Q86Y22 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC25.21■■□□□ 1.63
COL23A1Q86Y22 AC011558.1-201ENST00000623459 338 ntBASIC25.21■■□□□ 1.63
COL23A1Q86Y22 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC25.21■■□□□ 1.63
COL23A1Q86Y22 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
COL23A1Q86Y22 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC25.21■■□□□ 1.63
COL23A1Q86Y22 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL23A1Q86Y22 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL23A1Q86Y22 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL23A1Q86Y22 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
COL23A1Q86Y22 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC25.2■■□□□ 1.62
COL23A1Q86Y22 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
COL23A1Q86Y22 CALM3-202ENST00000391918 702 ntTSL 2 BASIC25.2■■□□□ 1.62
COL23A1Q86Y22 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
COL23A1Q86Y22 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
COL23A1Q86Y22 AC008040.2-201ENST00000461049 708 ntBASIC25.2■■□□□ 1.62
COL23A1Q86Y22 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC25.2■■□□□ 1.62
COL23A1Q86Y22 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC25.2■■□□□ 1.62
COL23A1Q86Y22 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC25.2■■□□□ 1.62
COL23A1Q86Y22 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC25.2■■□□□ 1.62
COL23A1Q86Y22 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.2■■□□□ 1.62
COL23A1Q86Y22 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms