Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC25Q86WR0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CCDC25Q86WR0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC25Q86WR0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC25Q86WR0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC25Q86WR0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC25Q86WR0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC25Q86WR0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.58■□□□□ 0.88
CCDC25Q86WR0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CCDC25Q86WR0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.58■□□□□ 0.88
CCDC25Q86WR0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC25Q86WR0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC25Q86WR0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
CCDC25Q86WR0 AC093484.2-201ENST00000580996 2166 ntBASIC20.58■□□□□ 0.88
CCDC25Q86WR0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC25Q86WR0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC25Q86WR0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC25Q86WR0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CCDC25Q86WR0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC25Q86WR0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
CCDC25Q86WR0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC25Q86WR0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC25Q86WR0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC25Q86WR0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CCDC25Q86WR0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC25Q86WR0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC25Q86WR0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC25Q86WR0 AC007322.3-201ENST00000426526 701 ntBASIC20.57■□□□□ 0.88
CCDC25Q86WR0 SUDS3P1-201ENST00000505831 966 ntBASIC20.57■□□□□ 0.88
CCDC25Q86WR0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC25Q86WR0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.57■□□□□ 0.88
CCDC25Q86WR0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC25Q86WR0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC25Q86WR0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC25Q86WR0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CCDC25Q86WR0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC25Q86WR0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC25Q86WR0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC25Q86WR0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC25Q86WR0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC25Q86WR0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC25Q86WR0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC25Q86WR0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC25Q86WR0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CCDC25Q86WR0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC25Q86WR0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC25Q86WR0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC25Q86WR0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC25Q86WR0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC25Q86WR0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC25Q86WR0 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.56■□□□□ 0.88
CCDC25Q86WR0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC25Q86WR0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC25Q86WR0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC25Q86WR0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC25Q86WR0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC25Q86WR0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC25Q86WR0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC25Q86WR0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CCDC25Q86WR0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC25Q86WR0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCDC25Q86WR0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCDC25Q86WR0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC25Q86WR0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC25Q86WR0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC25Q86WR0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC25Q86WR0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC25Q86WR0 AC091799.1-201ENST00000422823 811 ntBASIC20.55■□□□□ 0.88
CCDC25Q86WR0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC25Q86WR0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.55■□□□□ 0.88
CCDC25Q86WR0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCDC25Q86WR0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC25Q86WR0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC25Q86WR0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CCDC25Q86WR0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC25Q86WR0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC25Q86WR0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC25Q86WR0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC25Q86WR0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CCDC25Q86WR0 TNXA-203ENST00000507684 2038 ntBASIC20.54■□□□□ 0.88
CCDC25Q86WR0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC25Q86WR0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC25Q86WR0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC25Q86WR0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC25Q86WR0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC25Q86WR0 AC105265.2-201ENST00000467189 838 ntBASIC20.54■□□□□ 0.88
CCDC25Q86WR0 FAM21FP-204ENST00000608637 956 ntBASIC20.54■□□□□ 0.88
CCDC25Q86WR0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC25Q86WR0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC25Q86WR0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC25Q86WR0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC25Q86WR0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC25Q86WR0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC25Q86WR0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC25Q86WR0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC25Q86WR0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC25Q86WR0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC25Q86WR0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC25Q86WR0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC25Q86WR0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms