Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC24.49■■□□□ 1.51
USP48Q86UV5 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
USP48Q86UV5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
USP48Q86UV5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
USP48Q86UV5 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC24.49■■□□□ 1.51
USP48Q86UV5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
USP48Q86UV5 AL049796.1-201ENST00000565336 1766 ntBASIC24.49■■□□□ 1.51
USP48Q86UV5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
USP48Q86UV5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
USP48Q86UV5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
USP48Q86UV5 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC24.48■■□□□ 1.51
USP48Q86UV5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
USP48Q86UV5 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
USP48Q86UV5 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
USP48Q86UV5 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
USP48Q86UV5 FEM1AP1-201ENST00000431297 1995 ntBASIC24.48■■□□□ 1.51
USP48Q86UV5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
USP48Q86UV5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
USP48Q86UV5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
USP48Q86UV5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
USP48Q86UV5 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC24.48■■□□□ 1.51
USP48Q86UV5 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
USP48Q86UV5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
USP48Q86UV5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
USP48Q86UV5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
USP48Q86UV5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
USP48Q86UV5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
USP48Q86UV5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
USP48Q86UV5 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
USP48Q86UV5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
USP48Q86UV5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
USP48Q86UV5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
USP48Q86UV5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
USP48Q86UV5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC24.47■■□□□ 1.51
USP48Q86UV5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC24.47■■□□□ 1.51
USP48Q86UV5 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
USP48Q86UV5 AP003071.4-201ENST00000562276 1284 ntBASIC24.47■■□□□ 1.51
USP48Q86UV5 AL049597.2-201ENST00000565575 961 ntBASIC24.47■■□□□ 1.51
USP48Q86UV5 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
USP48Q86UV5 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
USP48Q86UV5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC24.47■■□□□ 1.51
USP48Q86UV5 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC24.47■■□□□ 1.51
USP48Q86UV5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
USP48Q86UV5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC24.47■■□□□ 1.51
USP48Q86UV5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC24.47■■□□□ 1.51
USP48Q86UV5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
USP48Q86UV5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC24.46■■□□□ 1.51
USP48Q86UV5 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
USP48Q86UV5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC24.46■■□□□ 1.51
USP48Q86UV5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
USP48Q86UV5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
USP48Q86UV5 MMP23A-201ENST00000234610 1017 ntBASIC24.46■■□□□ 1.51
USP48Q86UV5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC24.46■■□□□ 1.51
USP48Q86UV5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
USP48Q86UV5 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC24.46■■□□□ 1.51
USP48Q86UV5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC24.46■■□□□ 1.51
USP48Q86UV5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC24.46■■□□□ 1.51
USP48Q86UV5 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
USP48Q86UV5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
USP48Q86UV5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
USP48Q86UV5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
USP48Q86UV5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
USP48Q86UV5 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC24.45■■□□□ 1.51
USP48Q86UV5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
USP48Q86UV5 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC24.45■■□□□ 1.51
USP48Q86UV5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
USP48Q86UV5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
USP48Q86UV5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
USP48Q86UV5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
USP48Q86UV5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
USP48Q86UV5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
USP48Q86UV5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
USP48Q86UV5 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
USP48Q86UV5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC24.45■■□□□ 1.5
USP48Q86UV5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
USP48Q86UV5 SAPCD2P4-201ENST00000424595 1171 ntBASIC24.45■■□□□ 1.5
USP48Q86UV5 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC24.45■■□□□ 1.5
USP48Q86UV5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC24.45■■□□□ 1.5
USP48Q86UV5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC24.45■■□□□ 1.5
USP48Q86UV5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
USP48Q86UV5 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
USP48Q86UV5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
USP48Q86UV5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
USP48Q86UV5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
USP48Q86UV5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
USP48Q86UV5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
USP48Q86UV5 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
USP48Q86UV5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
USP48Q86UV5 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
USP48Q86UV5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
USP48Q86UV5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC24.44■■□□□ 1.5
USP48Q86UV5 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
USP48Q86UV5 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
USP48Q86UV5 AL590326.2-201ENST00000625139 305 ntBASIC24.44■■□□□ 1.5
USP48Q86UV5 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC24.44■■□□□ 1.5
USP48Q86UV5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
USP48Q86UV5 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
USP48Q86UV5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC24.44■■□□□ 1.5
USP48Q86UV5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC24.44■■□□□ 1.5
USP48Q86UV5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms