Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LCA10Q71F78 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LCA10Q71F78 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC10.75□□□□□ -0.69
LCA10Q71F78 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
LCA10Q71F78 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LCA10Q71F78 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LCA10Q71F78 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC10.75□□□□□ -0.69
LCA10Q71F78 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LCA10Q71F78 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC10.75□□□□□ -0.69
LCA10Q71F78 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
LCA10Q71F78 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LCA10Q71F78 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
LCA10Q71F78 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
LCA10Q71F78 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LCA10Q71F78 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC10.75□□□□□ -0.69
LCA10Q71F78 GOLGA2P6-201ENST00000340929 2049 ntBASIC10.75□□□□□ -0.69
LCA10Q71F78 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC10.75□□□□□ -0.69
LCA10Q71F78 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC10.75□□□□□ -0.69
LCA10Q71F78 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC10.75□□□□□ -0.69
LCA10Q71F78 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LCA10Q71F78 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LCA10Q71F78 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
LCA10Q71F78 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC10.75□□□□□ -0.69
LCA10Q71F78 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LCA10Q71F78 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LCA10Q71F78 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LCA10Q71F78 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC10.75□□□□□ -0.69
LCA10Q71F78 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC10.74□□□□□ -0.69
LCA10Q71F78 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
LCA10Q71F78 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC10.74□□□□□ -0.69
LCA10Q71F78 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
LCA10Q71F78 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 PLK5-205ENST00000642079 1969 ntBASIC10.74□□□□□ -0.69
LCA10Q71F78 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC10.74□□□□□ -0.69
LCA10Q71F78 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
LCA10Q71F78 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
LCA10Q71F78 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC10.74□□□□□ -0.69
LCA10Q71F78 OR6D1P-202ENST00000641007 5290 ntBASIC10.74□□□□□ -0.69
LCA10Q71F78 AC009102.2-201ENST00000606772 1639 ntBASIC10.74□□□□□ -0.69
LCA10Q71F78 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC10.74□□□□□ -0.69
LCA10Q71F78 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC10.74□□□□□ -0.69
LCA10Q71F78 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
LCA10Q71F78 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
LCA10Q71F78 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
LCA10Q71F78 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC10.74□□□□□ -0.69
LCA10Q71F78 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC10.74□□□□□ -0.69
LCA10Q71F78 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC10.74□□□□□ -0.69
LCA10Q71F78 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
LCA10Q71F78 HTR7P1-202ENST00000624664 4411 ntBASIC10.74□□□□□ -0.69
LCA10Q71F78 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
LCA10Q71F78 ANKRD26P3-201ENST00000454044 2748 ntBASIC10.74□□□□□ -0.69
LCA10Q71F78 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC10.74□□□□□ -0.69
LCA10Q71F78 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 AC068418.2-201ENST00000577309 3703 ntBASIC10.74□□□□□ -0.69
LCA10Q71F78 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
LCA10Q71F78 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC10.74□□□□□ -0.69
LCA10Q71F78 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
LCA10Q71F78 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
LCA10Q71F78 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LCA10Q71F78 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC10.74□□□□□ -0.69
LCA10Q71F78 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC10.74□□□□□ -0.69
LCA10Q71F78 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC10.73□□□□□ -0.69
LCA10Q71F78 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 AL596257.1-201ENST00000641463 2694 ntBASIC10.73□□□□□ -0.69
LCA10Q71F78 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
LCA10Q71F78 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
LCA10Q71F78 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms