Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.07■□□□□ 0.8
GDPD4Q6W3E5 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
GDPD4Q6W3E5 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.07■□□□□ 0.8
GDPD4Q6W3E5 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
GDPD4Q6W3E5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.07■□□□□ 0.8
GDPD4Q6W3E5 AL121906.2-201ENST00000621597 723 ntBASIC20.07■□□□□ 0.8
GDPD4Q6W3E5 AC066615.1-201ENST00000640911 628 ntBASIC20.07■□□□□ 0.8
GDPD4Q6W3E5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GDPD4Q6W3E5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GDPD4Q6W3E5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GDPD4Q6W3E5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GDPD4Q6W3E5 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GDPD4Q6W3E5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
GDPD4Q6W3E5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GDPD4Q6W3E5 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GDPD4Q6W3E5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.06■□□□□ 0.8
GDPD4Q6W3E5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GDPD4Q6W3E5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GDPD4Q6W3E5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
GDPD4Q6W3E5 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GDPD4Q6W3E5 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GDPD4Q6W3E5 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GDPD4Q6W3E5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.06■□□□□ 0.8
GDPD4Q6W3E5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GDPD4Q6W3E5 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.06■□□□□ 0.8
GDPD4Q6W3E5 AC239809.2-201ENST00000415381 517 ntBASIC20.06■□□□□ 0.8
GDPD4Q6W3E5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
GDPD4Q6W3E5 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.06■□□□□ 0.8
GDPD4Q6W3E5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.06■□□□□ 0.8
GDPD4Q6W3E5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
GDPD4Q6W3E5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GDPD4Q6W3E5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.06■□□□□ 0.8
GDPD4Q6W3E5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GDPD4Q6W3E5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
GDPD4Q6W3E5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GDPD4Q6W3E5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
GDPD4Q6W3E5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 UBE2SP1-201ENST00000450587 669 ntBASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 AC124016.1-201ENST00000609552 612 ntBASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 GABARAPL3-202ENST00000624044 1851 ntBASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GDPD4Q6W3E5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
GDPD4Q6W3E5 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GDPD4Q6W3E5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GDPD4Q6W3E5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
GDPD4Q6W3E5 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
GDPD4Q6W3E5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
GDPD4Q6W3E5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.04■□□□□ 0.8
GDPD4Q6W3E5 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GDPD4Q6W3E5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GDPD4Q6W3E5 KRASP1-201ENST00000407852 552 ntBASIC20.04■□□□□ 0.8
GDPD4Q6W3E5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.04■□□□□ 0.8
GDPD4Q6W3E5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GDPD4Q6W3E5 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.04■□□□□ 0.8
GDPD4Q6W3E5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.04■□□□□ 0.8
GDPD4Q6W3E5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.04■□□□□ 0.8
GDPD4Q6W3E5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.04■□□□□ 0.8
GDPD4Q6W3E5 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.04■□□□□ 0.8
GDPD4Q6W3E5 AP006294.2-201ENST00000641667 209 ntBASIC20.04■□□□□ 0.8
GDPD4Q6W3E5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GDPD4Q6W3E5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GDPD4Q6W3E5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GDPD4Q6W3E5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GDPD4Q6W3E5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GDPD4Q6W3E5 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GDPD4Q6W3E5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GDPD4Q6W3E5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GDPD4Q6W3E5 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GDPD4Q6W3E5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.03■□□□□ 0.8
GDPD4Q6W3E5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GDPD4Q6W3E5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GDPD4Q6W3E5 AC133681.1-201ENST00000465482 601 ntBASIC20.03■□□□□ 0.8
GDPD4Q6W3E5 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms