Protein–RNA interactions for Protein: Q5VX52

SPATA1, Spermatogenesis-associated protein 1, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA1Q5VX52 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SPATA1Q5VX52 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
SPATA1Q5VX52 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.29■■□□□ 1.16
SPATA1Q5VX52 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC22.29■■□□□ 1.16
SPATA1Q5VX52 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC22.29■■□□□ 1.16
SPATA1Q5VX52 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SPATA1Q5VX52 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
SPATA1Q5VX52 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SPATA1Q5VX52 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SPATA1Q5VX52 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SPATA1Q5VX52 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SPATA1Q5VX52 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC22.29■■□□□ 1.16
SPATA1Q5VX52 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.29■■□□□ 1.16
SPATA1Q5VX52 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SPATA1Q5VX52 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SPATA1Q5VX52 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
SPATA1Q5VX52 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPATA1Q5VX52 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPATA1Q5VX52 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPATA1Q5VX52 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.28■■□□□ 1.16
SPATA1Q5VX52 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SPATA1Q5VX52 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SPATA1Q5VX52 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.28■■□□□ 1.16
SPATA1Q5VX52 AC100791.3-201ENST00000617619 330 ntBASIC22.28■■□□□ 1.16
SPATA1Q5VX52 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.28■■□□□ 1.16
SPATA1Q5VX52 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SPATA1Q5VX52 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPATA1Q5VX52 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.28■■□□□ 1.16
SPATA1Q5VX52 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SPATA1Q5VX52 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC22.28■■□□□ 1.16
SPATA1Q5VX52 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.28■■□□□ 1.16
SPATA1Q5VX52 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPATA1Q5VX52 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.27■■□□□ 1.16
SPATA1Q5VX52 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPATA1Q5VX52 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.27■■□□□ 1.16
SPATA1Q5VX52 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SPATA1Q5VX52 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPATA1Q5VX52 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SPATA1Q5VX52 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC22.27■■□□□ 1.16
SPATA1Q5VX52 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.27■■□□□ 1.16
SPATA1Q5VX52 AC073210.2-201ENST00000430369 194 ntBASIC22.27■■□□□ 1.16
SPATA1Q5VX52 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.27■■□□□ 1.16
SPATA1Q5VX52 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.27■■□□□ 1.16
SPATA1Q5VX52 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPATA1Q5VX52 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPATA1Q5VX52 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
SPATA1Q5VX52 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPATA1Q5VX52 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SPATA1Q5VX52 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPATA1Q5VX52 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
SPATA1Q5VX52 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SPATA1Q5VX52 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SPATA1Q5VX52 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
SPATA1Q5VX52 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.26■■□□□ 1.15
SPATA1Q5VX52 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPATA1Q5VX52 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPATA1Q5VX52 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC22.26■■□□□ 1.15
SPATA1Q5VX52 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.26■■□□□ 1.15
SPATA1Q5VX52 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.26■■□□□ 1.15
SPATA1Q5VX52 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SPATA1Q5VX52 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.26■■□□□ 1.15
SPATA1Q5VX52 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPATA1Q5VX52 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC22.26■■□□□ 1.15
SPATA1Q5VX52 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPATA1Q5VX52 AC116562.4-201ENST00000641316 2276 ntBASIC22.26■■□□□ 1.15
SPATA1Q5VX52 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 BX276092.2-201ENST00000417668 665 ntBASIC22.25■■□□□ 1.15
SPATA1Q5VX52 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 AC069152.1-201ENST00000438030 544 ntBASIC22.25■■□□□ 1.15
SPATA1Q5VX52 ISCU-212ENST00000547005 795 ntTSL 3 BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 MIR4758-201ENST00000577688 71 ntBASIC22.25■■□□□ 1.15
SPATA1Q5VX52 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SPATA1Q5VX52 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPATA1Q5VX52 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms