Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FAM78BQ5VT40 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.82■□□□□ 0.12
FAM78BQ5VT40 MIR572-201ENST00000384983 95 ntBASIC15.82■□□□□ 0.12
FAM78BQ5VT40 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC15.82■□□□□ 0.12
FAM78BQ5VT40 AC008175.2-201ENST00000612840 297 ntBASIC15.82■□□□□ 0.12
FAM78BQ5VT40 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FAM78BQ5VT40 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FAM78BQ5VT40 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FAM78BQ5VT40 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FAM78BQ5VT40 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.82■□□□□ 0.12
FAM78BQ5VT40 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FAM78BQ5VT40 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
FAM78BQ5VT40 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.82■□□□□ 0.12
FAM78BQ5VT40 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FAM78BQ5VT40 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FAM78BQ5VT40 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.81■□□□□ 0.12
FAM78BQ5VT40 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
FAM78BQ5VT40 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM78BQ5VT40 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM78BQ5VT40 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM78BQ5VT40 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM78BQ5VT40 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FAM78BQ5VT40 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM78BQ5VT40 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM78BQ5VT40 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.81■□□□□ 0.12
FAM78BQ5VT40 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.81■□□□□ 0.12
FAM78BQ5VT40 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.81■□□□□ 0.12
FAM78BQ5VT40 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
FAM78BQ5VT40 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM78BQ5VT40 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.81■□□□□ 0.12
FAM78BQ5VT40 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.81■□□□□ 0.12
FAM78BQ5VT40 AC005837.3-201ENST00000612163 286 ntBASIC15.81■□□□□ 0.12
FAM78BQ5VT40 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FAM78BQ5VT40 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM78BQ5VT40 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
FAM78BQ5VT40 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM78BQ5VT40 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FAM78BQ5VT40 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM78BQ5VT40 NEFHP1-201ENST00000412845 2629 ntBASIC15.81■□□□□ 0.12
FAM78BQ5VT40 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FAM78BQ5VT40 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
FAM78BQ5VT40 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FAM78BQ5VT40 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FAM78BQ5VT40 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FAM78BQ5VT40 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FAM78BQ5VT40 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FAM78BQ5VT40 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FAM78BQ5VT40 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
FAM78BQ5VT40 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FAM78BQ5VT40 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
FAM78BQ5VT40 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.8■□□□□ 0.12
FAM78BQ5VT40 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC15.8■□□□□ 0.12
FAM78BQ5VT40 MIR2861-201ENST00000636310 90 ntBASIC15.8■□□□□ 0.12
FAM78BQ5VT40 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.8■□□□□ 0.12
FAM78BQ5VT40 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
FAM78BQ5VT40 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FAM78BQ5VT40 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FAM78BQ5VT40 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.8■□□□□ 0.12
FAM78BQ5VT40 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FAM78BQ5VT40 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FAM78BQ5VT40 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FAM78BQ5VT40 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
FAM78BQ5VT40 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
FAM78BQ5VT40 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.8■□□□□ 0.12
FAM78BQ5VT40 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 HYI-206ENST00000372434 1025 ntTSL 5 BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 POU5F1P4-201ENST00000413175 1085 ntBASIC15.79■□□□□ 0.12
FAM78BQ5VT40 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FAM78BQ5VT40 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FAM78BQ5VT40 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
FAM78BQ5VT40 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FAM78BQ5VT40 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
FAM78BQ5VT40 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms