Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 AC243732.1-201ENST00000612648 864 ntBASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 AL136967.2-201ENST00000623968 743 ntBASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00242Q5T6M2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
LINC00242Q5T6M2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 GOLGA2P11-201ENST00000562660 1621 ntBASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 AC105265.2-201ENST00000467189 838 ntBASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 MIR6084-201ENST00000622012 110 ntBASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00242Q5T6M2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 NME4-202ENST00000382940 766 ntTSL 3 BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 CCDC92B-201ENST00000575506 885 ntBASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 AP001160.3-201ENST00000601484 763 ntBASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 AC104187.1-201ENST00000607510 612 ntBASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 RBM17P2-201ENST00000616397 1405 ntBASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00242Q5T6M2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 AC009237.14-201ENST00000609975 1594 ntBASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms