Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC58Q4VC31 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CCDC58Q4VC31 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC58Q4VC31 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC58Q4VC31 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCDC58Q4VC31 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC58Q4VC31 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC58Q4VC31 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC58Q4VC31 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.8■□□□□ 0.44
CCDC58Q4VC31 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC58Q4VC31 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC58Q4VC31 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC58Q4VC31 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC58Q4VC31 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
CCDC58Q4VC31 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC58Q4VC31 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CCDC58Q4VC31 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC58Q4VC31 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC58Q4VC31 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC58Q4VC31 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC58Q4VC31 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 AC010141.2-201ENST00000452426 721 ntBASIC17.79■□□□□ 0.44
CCDC58Q4VC31 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC58Q4VC31 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC58Q4VC31 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC58Q4VC31 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC58Q4VC31 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC58Q4VC31 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC58Q4VC31 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC58Q4VC31 DPP3P2-201ENST00000416030 1696 ntBASIC17.78■□□□□ 0.44
CCDC58Q4VC31 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC58Q4VC31 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC58Q4VC31 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC58Q4VC31 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC58Q4VC31 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC58Q4VC31 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC58Q4VC31 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC58Q4VC31 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC58Q4VC31 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC58Q4VC31 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC58Q4VC31 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC58Q4VC31 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC58Q4VC31 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC58Q4VC31 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC58Q4VC31 BX119927.1-201ENST00000636596 1552 ntBASIC17.78■□□□□ 0.44
CCDC58Q4VC31 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CCDC58Q4VC31 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC58Q4VC31 AC106820.2-201ENST00000563775 3264 ntBASIC17.78■□□□□ 0.44
CCDC58Q4VC31 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC58Q4VC31 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC58Q4VC31 AL691432.2-201ENST00000607222 2038 ntBASIC17.77■□□□□ 0.44
CCDC58Q4VC31 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC58Q4VC31 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC58Q4VC31 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
CCDC58Q4VC31 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC58Q4VC31 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC58Q4VC31 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC58Q4VC31 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC58Q4VC31 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC58Q4VC31 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC58Q4VC31 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC58Q4VC31 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC58Q4VC31 AC096631.2-201ENST00000436136 790 ntBASIC17.77■□□□□ 0.44
CCDC58Q4VC31 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC58Q4VC31 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC58Q4VC31 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC58Q4VC31 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.77■□□□□ 0.43
CCDC58Q4VC31 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CCDC58Q4VC31 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
CCDC58Q4VC31 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.77■□□□□ 0.43
CCDC58Q4VC31 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC58Q4VC31 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC58Q4VC31 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC58Q4VC31 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC58Q4VC31 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC58Q4VC31 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms