Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN20Q4JDL3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN20Q4JDL3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN20Q4JDL3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.06■□□□□ 0.96
PTPN20Q4JDL3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.06■□□□□ 0.96
PTPN20Q4JDL3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.06■□□□□ 0.96
PTPN20Q4JDL3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.06■□□□□ 0.96
PTPN20Q4JDL3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN20Q4JDL3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.06■□□□□ 0.96
PTPN20Q4JDL3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN20Q4JDL3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN20Q4JDL3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN20Q4JDL3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.06■□□□□ 0.96
PTPN20Q4JDL3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN20Q4JDL3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN20Q4JDL3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN20Q4JDL3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN20Q4JDL3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.05■□□□□ 0.96
PTPN20Q4JDL3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.05■□□□□ 0.96
PTPN20Q4JDL3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN20Q4JDL3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN20Q4JDL3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN20Q4JDL3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.05■□□□□ 0.96
PTPN20Q4JDL3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN20Q4JDL3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.05■□□□□ 0.96
PTPN20Q4JDL3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN20Q4JDL3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN20Q4JDL3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN20Q4JDL3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.05■□□□□ 0.96
PTPN20Q4JDL3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN20Q4JDL3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN20Q4JDL3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.05■□□□□ 0.96
PTPN20Q4JDL3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PTPN20Q4JDL3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN20Q4JDL3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN20Q4JDL3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
PTPN20Q4JDL3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN20Q4JDL3 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.05■□□□□ 0.96
PTPN20Q4JDL3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 AC005829.2-201ENST00000571422 1056 ntBASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 HLA-B-256ENST00000639848 1089 ntBASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 KRT16P6-202ENST00000425692 1426 ntBASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN20Q4JDL3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN20Q4JDL3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN20Q4JDL3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN20Q4JDL3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN20Q4JDL3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.03■□□□□ 0.96
PTPN20Q4JDL3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN20Q4JDL3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.03■□□□□ 0.96
PTPN20Q4JDL3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN20Q4JDL3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN20Q4JDL3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN20Q4JDL3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN20Q4JDL3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN20Q4JDL3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PTPN20Q4JDL3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.02■□□□□ 0.96
PTPN20Q4JDL3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN20Q4JDL3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN20Q4JDL3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN20Q4JDL3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PTPN20Q4JDL3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN20Q4JDL3 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.02■□□□□ 0.96
PTPN20Q4JDL3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.02■□□□□ 0.96
PTPN20Q4JDL3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN20Q4JDL3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.02■□□□□ 0.96
PTPN20Q4JDL3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.02■□□□□ 0.96
PTPN20Q4JDL3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.02■□□□□ 0.96
PTPN20Q4JDL3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.02■□□□□ 0.96
PTPN20Q4JDL3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
PTPN20Q4JDL3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN20Q4JDL3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN20Q4JDL3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.02■□□□□ 0.96
PTPN20Q4JDL3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN20Q4JDL3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN20Q4JDL3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN20Q4JDL3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.02■□□□□ 0.96
PTPN20Q4JDL3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
PTPN20Q4JDL3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
PTPN20Q4JDL3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms