Protein–RNA interactions for Protein: Q08209

PPP3CA, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CAQ08209 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PPP3CAQ08209 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PPP3CAQ08209 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PPP3CAQ08209 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PPP3CAQ08209 HLA-G-202ENST00000376815 851 ntBASIC21.61■■□□□ 1.05
PPP3CAQ08209 HLA-G-203ENST00000376818 1127 ntBASIC21.61■■□□□ 1.05
PPP3CAQ08209 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PPP3CAQ08209 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.61■■□□□ 1.05
PPP3CAQ08209 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.61■■□□□ 1.05
PPP3CAQ08209 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.61■■□□□ 1.05
PPP3CAQ08209 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.61■■□□□ 1.05
PPP3CAQ08209 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
PPP3CAQ08209 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.61■■□□□ 1.05
PPP3CAQ08209 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PPP3CAQ08209 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.61■■□□□ 1.05
PPP3CAQ08209 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.61■■□□□ 1.05
PPP3CAQ08209 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PPP3CAQ08209 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PPP3CAQ08209 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP3CAQ08209 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP3CAQ08209 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP3CAQ08209 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PPP3CAQ08209 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PPP3CAQ08209 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PPP3CAQ08209 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP3CAQ08209 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.6■■□□□ 1.05
PPP3CAQ08209 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP3CAQ08209 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP3CAQ08209 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP3CAQ08209 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP3CAQ08209 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.6■■□□□ 1.05
PPP3CAQ08209 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.6■■□□□ 1.05
PPP3CAQ08209 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.6■■□□□ 1.05
PPP3CAQ08209 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PPP3CAQ08209 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP3CAQ08209 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPP3CAQ08209 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PPP3CAQ08209 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.59■■□□□ 1.05
PPP3CAQ08209 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.59■■□□□ 1.05
PPP3CAQ08209 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.59■■□□□ 1.05
PPP3CAQ08209 KRT16P6-202ENST00000425692 1426 ntBASIC21.59■■□□□ 1.05
PPP3CAQ08209 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PPP3CAQ08209 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.59■■□□□ 1.05
PPP3CAQ08209 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.59■■□□□ 1.05
PPP3CAQ08209 AC005829.2-201ENST00000571422 1056 ntBASIC21.59■■□□□ 1.05
PPP3CAQ08209 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.59■■□□□ 1.05
PPP3CAQ08209 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.59■■□□□ 1.05
PPP3CAQ08209 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPP3CAQ08209 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PPP3CAQ08209 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PPP3CAQ08209 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PPP3CAQ08209 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.58■■□□□ 1.05
PPP3CAQ08209 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PPP3CAQ08209 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PPP3CAQ08209 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
PPP3CAQ08209 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
PPP3CAQ08209 HLA-B-256ENST00000639848 1089 ntBASIC21.58■■□□□ 1.05
PPP3CAQ08209 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.58■■□□□ 1.05
PPP3CAQ08209 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PPP3CAQ08209 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.58■■□□□ 1.04
PPP3CAQ08209 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PPP3CAQ08209 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.58■■□□□ 1.04
PPP3CAQ08209 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.58■■□□□ 1.04
PPP3CAQ08209 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.57■■□□□ 1.04
PPP3CAQ08209 AC125437.2-201ENST00000625180 2167 ntBASIC21.57■■□□□ 1.04
PPP3CAQ08209 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP3CAQ08209 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PPP3CAQ08209 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP3CAQ08209 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP3CAQ08209 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP3CAQ08209 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PPP3CAQ08209 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PPP3CAQ08209 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.57■■□□□ 1.04
PPP3CAQ08209 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.57■■□□□ 1.04
PPP3CAQ08209 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP3CAQ08209 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PPP3CAQ08209 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.57■■□□□ 1.04
PPP3CAQ08209 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.57■■□□□ 1.04
PPP3CAQ08209 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.57■■□□□ 1.04
PPP3CAQ08209 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.57■■□□□ 1.04
PPP3CAQ08209 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.57■■□□□ 1.04
PPP3CAQ08209 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PPP3CAQ08209 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP3CAQ08209 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.57■■□□□ 1.04
PPP3CAQ08209 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PPP3CAQ08209 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP3CAQ08209 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP3CAQ08209 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PPP3CAQ08209 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PPP3CAQ08209 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP3CAQ08209 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.56■■□□□ 1.04
PPP3CAQ08209 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PPP3CAQ08209 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP3CAQ08209 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.56■■□□□ 1.04
PPP3CAQ08209 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.56■■□□□ 1.04
PPP3CAQ08209 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.56■■□□□ 1.04
PPP3CAQ08209 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.56■■□□□ 1.04
PPP3CAQ08209 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.56■■□□□ 1.04
PPP3CAQ08209 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.56■■□□□ 1.04
PPP3CAQ08209 AC006557.6-201ENST00000623071 864 ntBASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms