Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH1Q08174 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDH1Q08174 AC083906.2-201ENST00000511578 360 ntBASIC19.27■□□□□ 0.68
PCDH1Q08174 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDH1Q08174 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PCDH1Q08174 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH1Q08174 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.27■□□□□ 0.67
PCDH1Q08174 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH1Q08174 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.27■□□□□ 0.67
PCDH1Q08174 AC009237.14-201ENST00000609975 1594 ntBASIC19.27■□□□□ 0.67
PCDH1Q08174 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH1Q08174 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH1Q08174 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.27■□□□□ 0.67
PCDH1Q08174 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH1Q08174 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH1Q08174 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH1Q08174 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDH1Q08174 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH1Q08174 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PCDH1Q08174 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH1Q08174 KRT16P6-202ENST00000425692 1426 ntBASIC19.26■□□□□ 0.67
PCDH1Q08174 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
PCDH1Q08174 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH1Q08174 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH1Q08174 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH1Q08174 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH1Q08174 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDH1Q08174 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDH1Q08174 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDH1Q08174 HLA-G-202ENST00000376815 851 ntBASIC19.26■□□□□ 0.67
PCDH1Q08174 HLA-G-203ENST00000376818 1127 ntBASIC19.26■□□□□ 0.67
PCDH1Q08174 GPX1P1-201ENST00000388829 606 ntBASIC19.26■□□□□ 0.67
PCDH1Q08174 GUSBP6-202ENST00000438529 1198 ntBASIC19.26■□□□□ 0.67
PCDH1Q08174 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH1Q08174 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH1Q08174 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDH1Q08174 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.26■□□□□ 0.67
PCDH1Q08174 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDH1Q08174 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH1Q08174 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH1Q08174 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH1Q08174 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH1Q08174 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PCDH1Q08174 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH1Q08174 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH1Q08174 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.25■□□□□ 0.67
PCDH1Q08174 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH1Q08174 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH1Q08174 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDH1Q08174 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDH1Q08174 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDH1Q08174 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH1Q08174 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PCDH1Q08174 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDH1Q08174 MIPEPP3-201ENST00000412105 444 ntBASIC19.25■□□□□ 0.67
PCDH1Q08174 BX276092.2-201ENST00000417668 665 ntBASIC19.25■□□□□ 0.67
PCDH1Q08174 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH1Q08174 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH1Q08174 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDH1Q08174 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PCDH1Q08174 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDH1Q08174 AC092118.2-201ENST00000613495 667 ntBASIC19.25■□□□□ 0.67
PCDH1Q08174 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH1Q08174 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDH1Q08174 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH1Q08174 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.24■□□□□ 0.67
PCDH1Q08174 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH1Q08174 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH1Q08174 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCDH1Q08174 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH1Q08174 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PCDH1Q08174 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH1Q08174 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH1Q08174 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCDH1Q08174 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH1Q08174 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH1Q08174 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH1Q08174 AC073210.2-201ENST00000430369 194 ntBASIC19.24■□□□□ 0.67
PCDH1Q08174 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCDH1Q08174 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.24■□□□□ 0.67
PCDH1Q08174 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDH1Q08174 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDH1Q08174 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH1Q08174 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH1Q08174 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDH1Q08174 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PCDH1Q08174 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDH1Q08174 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCDH1Q08174 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH1Q08174 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH1Q08174 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDH1Q08174 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PCDH1Q08174 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDH1Q08174 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH1Q08174 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
PCDH1Q08174 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH1Q08174 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH1Q08174 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDH1Q08174 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH1Q08174 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms