Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN20P56880 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN20P56880 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN20P56880 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN20P56880 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN20P56880 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.29■□□□□ 0.52
CLDN20P56880 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.29■□□□□ 0.52
CLDN20P56880 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN20P56880 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN20P56880 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN20P56880 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN20P56880 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN20P56880 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN20P56880 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CLDN20P56880 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.29■□□□□ 0.52
CLDN20P56880 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN20P56880 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CLDN20P56880 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN20P56880 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN20P56880 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN20P56880 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN20P56880 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN20P56880 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.28■□□□□ 0.52
CLDN20P56880 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN20P56880 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN20P56880 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN20P56880 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN20P56880 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN20P56880 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN20P56880 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN20P56880 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN20P56880 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.28■□□□□ 0.52
CLDN20P56880 RNA5SP413-201ENST00000516373 109 ntBASIC18.28■□□□□ 0.52
CLDN20P56880 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.28■□□□□ 0.52
CLDN20P56880 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.28■□□□□ 0.52
CLDN20P56880 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN20P56880 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN20P56880 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN20P56880 KRT8P36-201ENST00000489121 1440 ntBASIC18.28■□□□□ 0.52
CLDN20P56880 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CLDN20P56880 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN20P56880 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN20P56880 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
CLDN20P56880 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN20P56880 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN20P56880 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN20P56880 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.27■□□□□ 0.52
CLDN20P56880 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN20P56880 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN20P56880 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.27■□□□□ 0.52
CLDN20P56880 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN20P56880 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.27■□□□□ 0.52
CLDN20P56880 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN20P56880 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CLDN20P56880 C2orf69P4-201ENST00000565394 541 ntBASIC18.27■□□□□ 0.52
CLDN20P56880 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN20P56880 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN20P56880 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.27■□□□□ 0.52
CLDN20P56880 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CLDN20P56880 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN20P56880 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN20P56880 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN20P56880 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
CLDN20P56880 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN20P56880 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN20P56880 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN20P56880 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN20P56880 PCDHAC2-203ENST00000615316 3011 ntBASIC18.26■□□□□ 0.51
CLDN20P56880 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN20P56880 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN20P56880 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN20P56880 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN20P56880 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN20P56880 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN20P56880 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN20P56880 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN20P56880 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.26■□□□□ 0.51
CLDN20P56880 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.26■□□□□ 0.51
CLDN20P56880 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN20P56880 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.26■□□□□ 0.51
CLDN20P56880 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CLDN20P56880 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN20P56880 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN20P56880 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN20P56880 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.26■□□□□ 0.51
CLDN20P56880 AC007225.1-201ENST00000566331 1836 ntBASIC18.26■□□□□ 0.51
CLDN20P56880 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDN20P56880 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN20P56880 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN20P56880 AC073314.1-201ENST00000568729 2216 ntBASIC18.25■□□□□ 0.51
CLDN20P56880 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN20P56880 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN20P56880 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.25■□□□□ 0.51
CLDN20P56880 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN20P56880 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN20P56880 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN20P56880 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN20P56880 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CLDN20P56880 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN20P56880 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms