Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.42■□□□□ 0.54
PER3P56645 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PER3P56645 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PER3P56645 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PER3P56645 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PER3P56645 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PER3P56645 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PER3P56645 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PER3P56645 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.42■□□□□ 0.54
PER3P56645 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.42■□□□□ 0.54
PER3P56645 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.42■□□□□ 0.54
PER3P56645 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PER3P56645 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.42■□□□□ 0.54
PER3P56645 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.42■□□□□ 0.54
PER3P56645 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PER3P56645 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PER3P56645 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PER3P56645 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PER3P56645 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PER3P56645 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PER3P56645 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PER3P56645 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.41■□□□□ 0.54
PER3P56645 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.41■□□□□ 0.54
PER3P56645 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.41■□□□□ 0.54
PER3P56645 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PER3P56645 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PER3P56645 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PER3P56645 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PER3P56645 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PER3P56645 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.41■□□□□ 0.54
PER3P56645 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PER3P56645 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PER3P56645 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PER3P56645 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PER3P56645 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.41■□□□□ 0.54
PER3P56645 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PER3P56645 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.41■□□□□ 0.54
PER3P56645 AC233702.5-201ENST00000584107 538 ntBASIC18.41■□□□□ 0.54
PER3P56645 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PER3P56645 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
PER3P56645 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PER3P56645 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.41■□□□□ 0.54
PER3P56645 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PER3P56645 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PER3P56645 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.41■□□□□ 0.54
PER3P56645 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PER3P56645 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PER3P56645 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PER3P56645 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.41■□□□□ 0.54
PER3P56645 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PER3P56645 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PER3P56645 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PER3P56645 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PER3P56645 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.4■□□□□ 0.54
PER3P56645 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
PER3P56645 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.4■□□□□ 0.54
PER3P56645 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PER3P56645 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PER3P56645 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PER3P56645 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PER3P56645 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PER3P56645 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.4■□□□□ 0.54
PER3P56645 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PER3P56645 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.4■□□□□ 0.54
PER3P56645 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.4■□□□□ 0.54
PER3P56645 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PER3P56645 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PER3P56645 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.4■□□□□ 0.54
PER3P56645 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PER3P56645 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.4■□□□□ 0.54
PER3P56645 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PER3P56645 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
PER3P56645 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PER3P56645 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PER3P56645 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PER3P56645 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.4■□□□□ 0.54
PER3P56645 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PER3P56645 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PER3P56645 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
PER3P56645 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
PER3P56645 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PER3P56645 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PER3P56645 RPS2P55-201ENST00000397318 883 ntBASIC18.39■□□□□ 0.53
PER3P56645 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.39■□□□□ 0.53
PER3P56645 AC107956.1-201ENST00000494359 873 ntBASIC18.39■□□□□ 0.53
PER3P56645 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PER3P56645 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.39■□□□□ 0.53
PER3P56645 MIR4785-201ENST00000585005 73 ntBASIC18.39■□□□□ 0.53
PER3P56645 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
PER3P56645 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PER3P56645 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PER3P56645 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PER3P56645 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PER3P56645 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.39■□□□□ 0.53
PER3P56645 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
PER3P56645 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PER3P56645 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.39■□□□□ 0.53
PER3P56645 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PER3P56645 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PER3P56645 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms