Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC22.04■■□□□ 1.12
PEX3P56589 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
PEX3P56589 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
PEX3P56589 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PEX3P56589 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PEX3P56589 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.04■■□□□ 1.12
PEX3P56589 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PEX3P56589 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PEX3P56589 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PEX3P56589 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PEX3P56589 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PEX3P56589 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PEX3P56589 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PEX3P56589 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PEX3P56589 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PEX3P56589 AC124283.5-201ENST00000624661 1809 ntBASIC22.03■■□□□ 1.12
PEX3P56589 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
PEX3P56589 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PEX3P56589 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
PEX3P56589 POM121L13P-201ENST00000422362 380 ntBASIC22.03■■□□□ 1.12
PEX3P56589 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PEX3P56589 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.03■■□□□ 1.12
PEX3P56589 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.03■■□□□ 1.12
PEX3P56589 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.03■■□□□ 1.12
PEX3P56589 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PEX3P56589 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
PEX3P56589 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PEX3P56589 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PEX3P56589 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.03■■□□□ 1.12
PEX3P56589 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PEX3P56589 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PEX3P56589 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PEX3P56589 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PEX3P56589 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
PEX3P56589 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PEX3P56589 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PEX3P56589 LINC01521-201ENST00000504184 1943 ntBASIC22.02■■□□□ 1.12
PEX3P56589 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.02■■□□□ 1.12
PEX3P56589 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PEX3P56589 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PEX3P56589 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
PEX3P56589 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.02■■□□□ 1.12
PEX3P56589 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.02■■□□□ 1.12
PEX3P56589 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PEX3P56589 BX119927.1-201ENST00000636596 1552 ntBASIC22.02■■□□□ 1.12
PEX3P56589 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PEX3P56589 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PEX3P56589 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PEX3P56589 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
PEX3P56589 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC22.02■■□□□ 1.11
PEX3P56589 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
PEX3P56589 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PEX3P56589 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PEX3P56589 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.01■■□□□ 1.11
PEX3P56589 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PEX3P56589 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
PEX3P56589 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PEX3P56589 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PEX3P56589 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
PEX3P56589 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
PEX3P56589 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.01■■□□□ 1.11
PEX3P56589 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PEX3P56589 KRT16P6-202ENST00000425692 1426 ntBASIC22.01■■□□□ 1.11
PEX3P56589 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PEX3P56589 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PEX3P56589 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.01■■□□□ 1.11
PEX3P56589 KRT17P3-201ENST00000420566 1262 ntBASIC22.01■■□□□ 1.11
PEX3P56589 AC128676.1-201ENST00000454392 318 ntBASIC22.01■■□□□ 1.11
PEX3P56589 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.01■■□□□ 1.11
PEX3P56589 RPS2P52-201ENST00000469610 820 ntBASIC22.01■■□□□ 1.11
PEX3P56589 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.01■■□□□ 1.11
PEX3P56589 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.01■■□□□ 1.11
PEX3P56589 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PEX3P56589 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
PEX3P56589 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
PEX3P56589 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PEX3P56589 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
PEX3P56589 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
PEX3P56589 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PEX3P56589 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
PEX3P56589 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PEX3P56589 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
PEX3P56589 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC22■■□□□ 1.11
PEX3P56589 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
PEX3P56589 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC22■■□□□ 1.11
PEX3P56589 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22■■□□□ 1.11
PEX3P56589 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22■■□□□ 1.11
PEX3P56589 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
PEX3P56589 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22■■□□□ 1.11
PEX3P56589 AC233263.1-201ENST00000578059 224 ntBASIC22■■□□□ 1.11
PEX3P56589 ITM2C-210ENST00000620962 501 ntBASIC22■■□□□ 1.11
PEX3P56589 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22■■□□□ 1.11
PEX3P56589 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22■■□□□ 1.11
PEX3P56589 AC073648.6-201ENST00000641589 218 ntBASIC22■■□□□ 1.11
PEX3P56589 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PEX3P56589 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22■■□□□ 1.11
PEX3P56589 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC22■■□□□ 1.11
PEX3P56589 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PEX3P56589 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
PEX3P56589 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms