Protein–RNA interactions for Protein: P53628

SNF12, Transcription regulatory protein SNF12, yeastyeast

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNF12P53628 HKR1YDR420W 5409 nt1.35□□□□□ -2.19
SNF12P53628 YOR329W-AYOR329W-A 210 nt1.34□□□□□ -2.19
SNF12P53628 YNL067W-BYNL067W-B 141 nt1.33□□□□□ -2.2
SNF12P53628 QCR9YGR183C 201 nt1.32□□□□□ -2.2
SNF12P53628 TRM732YMR259C 4263 nt1.32□□□□□ -2.2
SNF12P53628 YLR232WYLR232W 348 nt1.31□□□□□ -2.2
SNF12P53628 YCS4YLR272C 3531 nt1.31□□□□□ -2.2
SNF12P53628 YCR095W-AYCR095W-A 159 nt1.3□□□□□ -2.2
SNF12P53628 YBR099CYBR099C 384 nt1.3□□□□□ -2.2
SNF12P53628 SEC3YER008C 4011 nt1.29□□□□□ -2.2
SNF12P53628 RAD9YDR217C 3930 nt1.29□□□□□ -2.2
SNF12P53628 STB6YKL072W 2301 nt1.28□□□□□ -2.2
SNF12P53628 PRP16YKR086W 3216 nt1.28□□□□□ -2.2
SNF12P53628 SOM1YEL059C-A 225 nt1.28□□□□□ -2.2
SNF12P53628 tM(CAU)Q2tM(CAU)Q2 78 nt1.28□□□□□ -2.2
SNF12P53628 ANS1YHR126C 480 nt1.28□□□□□ -2.2
SNF12P53628 OST4YDL232W 111 nt1.27□□□□□ -2.21
SNF12P53628 YDR544CYDR544C 429 nt1.27□□□□□ -2.21
SNF12P53628 YLR041WYLR041W 321 nt1.27□□□□□ -2.21
SNF12P53628 CDC25YLR310C 4770 nt1.27□□□□□ -2.21
SNF12P53628 BEM3YPL115C 3387 nt1.24□□□□□ -2.21
SNF12P53628 YNL284C-BYNL284C-B 5268 nt1.24□□□□□ -2.21
SNF12P53628 SEC8YPR055W 3198 nt1.24□□□□□ -2.21
SNF12P53628 CLU1YMR012W 3834 nt1.23□□□□□ -2.21
SNF12P53628 PMP2YEL017C-A 132 nt1.22□□□□□ -2.21
SNF12P53628 snR39BsnR39B 96 nt1.22□□□□□ -2.21
SNF12P53628 CDC39YCR093W 6327 nt1.22□□□□□ -2.21
SNF12P53628 ASE1YOR058C 2658 nt1.22□□□□□ -2.21
SNF12P53628 MSH3YCR092C 3057 nt1.2□□□□□ -2.22
SNF12P53628 YHR131W-AYHR131W-A 246 nt1.2□□□□□ -2.22
SNF12P53628 YIL071W-AYIL071W-A 477 nt1.2□□□□□ -2.22
SNF12P53628 YDL073WYDL073W 2955 nt1.18□□□□□ -2.22
SNF12P53628 ROM2YLR371W 4071 nt1.18□□□□□ -2.22
SNF12P53628 tH(GUG)E1tH(GUG)E1 72 nt1.18□□□□□ -2.22
SNF12P53628 tH(GUG)E2tH(GUG)E2 72 nt1.18□□□□□ -2.22
SNF12P53628 tH(GUG)G1tH(GUG)G1 72 nt1.18□□□□□ -2.22
SNF12P53628 tH(GUG)G2tH(GUG)G2 72 nt1.18□□□□□ -2.22
SNF12P53628 tH(GUG)HtH(GUG)H 72 nt1.18□□□□□ -2.22
SNF12P53628 tH(GUG)KtH(GUG)K 72 nt1.18□□□□□ -2.22
SNF12P53628 tH(GUG)MtH(GUG)M 72 nt1.18□□□□□ -2.22
SNF12P53628 YJL127W-AYJL127W-A 117 nt1.18□□□□□ -2.22
SNF12P53628 YLR399W-AYLR399W-A 105 nt1.18□□□□□ -2.22
SNF12P53628 YDR210WYDR210W 228 nt1.17□□□□□ -2.22
SNF12P53628 YNL103W-AYNL103W-A 90 nt1.15□□□□□ -2.23
SNF12P53628 YPR160W-AYPR160W-A 81 nt1.15□□□□□ -2.23
SNF12P53628 COG6YNL041C 2520 nt1.14□□□□□ -2.23
SNF12P53628 TFB5YDR079C-A 219 nt1.14□□□□□ -2.23
SNF12P53628 YDR524C-AYDR524C-A 120 nt1.14□□□□□ -2.23
SNF12P53628 tN(GUU)QtN(GUU)Q 71 nt1.14□□□□□ -2.23
SNF12P53628 LAA1YJL207C 6045 nt1.14□□□□□ -2.23
SNF12P53628 NST1YNL091W 3723 nt1.13□□□□□ -2.23
SNF12P53628 VAM6YDL077C 3150 nt1.12□□□□□ -2.23
SNF12P53628 SPT7YBR081C 3999 nt1.12□□□□□ -2.23
SNF12P53628 UBP3YER151C 2739 nt1.12□□□□□ -2.23
SNF12P53628 STF2YGR008C 255 nt1.11□□□□□ -2.23
SNF12P53628 YJR029WYJR029W 5268 nt1.09□□□□□ -2.23
SNF12P53628 YPR137C-BYPR137C-B 5268 nt1.09□□□□□ -2.23
SNF12P53628 YGR146C-AYGR146C-A 162 nt1.09□□□□□ -2.23
SNF12P53628 YMR326CYMR326C 309 nt1.09□□□□□ -2.23
SNF12P53628 YSP1YHR155W 3687 nt1.09□□□□□ -2.24
SNF12P53628 BUD3YCL014W 4911 nt1.08□□□□□ -2.24
SNF12P53628 snR61snR61 90 nt1.08□□□□□ -2.24
SNF12P53628 KAP120YPL125W 3099 nt1.07□□□□□ -2.24
SNF12P53628 YGR130CYGR130C 2451 nt1.07□□□□□ -2.24
SNF12P53628 YBL109WYBL109W 336 nt1.07□□□□□ -2.24
SNF12P53628 BEM2YER155C 6504 nt1.06□□□□□ -2.24
SNF12P53628 YBR072C-AYBR072C-A 162 nt1.05□□□□□ -2.24
SNF12P53628 YBR178WYBR178W 375 nt1.05□□□□□ -2.24
SNF12P53628 SEC1YDR164C 2175 nt1.04□□□□□ -2.24
SNF12P53628 IML1YJR138W 4755 nt1.04□□□□□ -2.24
SNF12P53628 BIR1YJR089W 2865 nt1.02□□□□□ -2.25
SNF12P53628 GLG1YKR058W 1851 nt1.02□□□□□ -2.25
SNF12P53628 SIP4YJL089W 2490 nt1.01□□□□□ -2.25
SNF12P53628 tV(UAC)BtV(UAC)B 74 nt1□□□□□ -2.25
SNF12P53628 tV(UAC)DtV(UAC)D 74 nt1□□□□□ -2.25
SNF12P53628 YGL041C-BYGL041C-B 183 nt0.99□□□□□ -2.25
SNF12P53628 YNL266WYNL266W 420 nt0.99□□□□□ -2.25
SNF12P53628 SCC2YDR180W 4482 nt0.97□□□□□ -2.25
SNF12P53628 EMT1tM(CAU)D 73 nt0.97□□□□□ -2.25
SNF12P53628 EMT5tM(CAU)J1 73 nt0.97□□□□□ -2.25
SNF12P53628 EMT3tM(CAU)J2 73 nt0.97□□□□□ -2.25
SNF12P53628 EMT4tM(CAU)M 73 nt0.97□□□□□ -2.25
SNF12P53628 EMT2tM(CAU)O2 73 nt0.97□□□□□ -2.25
SNF12P53628 YLL006W-AYLL006W-A 177 nt0.97□□□□□ -2.25
SNF12P53628 DOP1YDR141C 5097 nt0.97□□□□□ -2.25
SNF12P53628 ULP2YIL031W 3105 nt0.97□□□□□ -2.25
SNF12P53628 CSE1YGL238W 2883 nt0.97□□□□□ -2.25
SNF12P53628 YHR217CYHR217C 462 nt0.96□□□□□ -2.26
SNF12P53628 RKR1YMR247C 4689 nt0.95□□□□□ -2.26
SNF12P53628 RCO1YMR075W 2055 nt0.95□□□□□ -2.26
SNF12P53628 RPM2YML091C 3609 nt0.93□□□□□ -2.26
SNF12P53628 NNF2YGR089W 2811 nt0.93□□□□□ -2.26
SNF12P53628 HUG1YML058W-A 207 nt0.92□□□□□ -2.26
SNF12P53628 SBH1YER087C-B 249 nt0.9□□□□□ -2.27
SNF12P53628 YPR117WYPR117W 7470 nt0.9□□□□□ -2.27
SNF12P53628 YBR196C-AYBR196C-A 150 nt0.88□□□□□ -2.27
SNF12P53628 SEC10YLR166C 2616 nt0.87□□□□□ -2.27
SNF12P53628 YOR192C-BYOR192C-B 5313 nt0.85□□□□□ -2.27
SNF12P53628 PAU24YBR301W 363 nt0.84□□□□□ -2.27
SNF12P53628 NIP1YMR309C 2439 nt0.83□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms