Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-5P52952 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-5P52952 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-5P52952 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.07■□□□□ 0.32
NKX2-5P52952 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-5P52952 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.07■□□□□ 0.32
NKX2-5P52952 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.07■□□□□ 0.32
NKX2-5P52952 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-5P52952 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.07■□□□□ 0.32
NKX2-5P52952 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-5P52952 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-5P52952 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-5P52952 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-5P52952 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NKX2-5P52952 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
NKX2-5P52952 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-5P52952 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-5P52952 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-5P52952 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-5P52952 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NKX2-5P52952 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-5P52952 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-5P52952 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
NKX2-5P52952 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-5P52952 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-5P52952 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-5P52952 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-5P52952 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-5P52952 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-5P52952 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-5P52952 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NKX2-5P52952 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-5P52952 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-5P52952 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-5P52952 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-5P52952 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-5P52952 AC090164.3-201ENST00000610780 2143 ntBASIC17.05■□□□□ 0.32
NKX2-5P52952 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-5P52952 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-5P52952 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-5P52952 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-5P52952 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.05■□□□□ 0.32
NKX2-5P52952 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.05■□□□□ 0.32
NKX2-5P52952 AC092296.2-201ENST00000589470 999 ntBASIC17.05■□□□□ 0.32
NKX2-5P52952 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-5P52952 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
NKX2-5P52952 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-5P52952 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.05■□□□□ 0.32
NKX2-5P52952 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-5P52952 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NKX2-5P52952 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-5P52952 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NKX2-5P52952 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-5P52952 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
NKX2-5P52952 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-5P52952 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-5P52952 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
NKX2-5P52952 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-5P52952 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-5P52952 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-5P52952 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-5P52952 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-5P52952 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NKX2-5P52952 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-5P52952 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-5P52952 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-5P52952 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-5P52952 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.04■□□□□ 0.32
NKX2-5P52952 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-5P52952 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-5P52952 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-5P52952 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.04■□□□□ 0.32
NKX2-5P52952 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-5P52952 AC046158.3-201ENST00000624947 2558 ntBASIC17.04■□□□□ 0.32
NKX2-5P52952 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.04■□□□□ 0.32
NKX2-5P52952 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-5P52952 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.04■□□□□ 0.32
NKX2-5P52952 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-5P52952 BICD1-207ENST00000551848 1962 ntBASIC17.04■□□□□ 0.32
NKX2-5P52952 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-5P52952 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NKX2-5P52952 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.03■□□□□ 0.32
NKX2-5P52952 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NKX2-5P52952 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NKX2-5P52952 TMEM179-206ENST00000616017 1645 ntBASIC17.03■□□□□ 0.32
NKX2-5P52952 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NKX2-5P52952 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
NKX2-5P52952 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.03■□□□□ 0.32
NKX2-5P52952 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX2-5P52952 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.03■□□□□ 0.32
NKX2-5P52952 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX2-5P52952 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX2-5P52952 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NKX2-5P52952 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.03■□□□□ 0.32
NKX2-5P52952 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.03■□□□□ 0.32
NKX2-5P52952 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
NKX2-5P52952 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX2-5P52952 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX2-5P52952 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX2-5P52952 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms